Miyakogusa Predicted Gene
- Lj0g3v0102289.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0102289.1 Non Chatacterized Hit- tr|I3SC80|I3SC80_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.06,0,DNA_pol3_delta2,NULL; Rep_fac_C,Replication factor C,
C-terminal domain; REPLICATION FACTOR C / DNA ,CUFF.5766.1
(963 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60980 similar to UniRef100_A7PZY4 Cluster: Chromosome... 1905 0.0
gnl|LJGI|TC72124 similar to UniRef100_Q84N07 Cluster: Replicatio... 1292 0.0
>gnl|LJGI|TC60980 similar to UniRef100_A7PZY4 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 1362
Score = 1905 bits (961), Expect = 0.0
Identities = 961/961 (100%)
Strand = Plus / Plus
Query: 1 atgttgtgggtggacaagtaccgtcccaaaaccctagatcaggttatggtccacgacgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 atgttgtgggtggacaagtaccgtcccaaaaccctagatcaggttatggtccacgacgat 136
Query: 61 gtcgctcaaaacctcaagaaattggttacggaacaggattgtccccatttgctattctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gtcgctcaaaacctcaagaaattggttacggaacaggattgtccccatttgctattctat 196
Query: 121 ggtccatctggttctggcaagaaaaccctaatcatggcgcttctccgccaaatgttcgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ggtccatctggttctggcaagaaaaccctaatcatggcgcttctccgccaaatgttcgga 256
Query: 181 actgctgccgaaaaggtgaaggtggaaaataggacgtggaaagtggatgctggaagtaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 actgctgccgaaaaggtgaaggtggaaaataggacgtggaaagtggatgctggaagtaga 316
Query: 241 tcaattgatttagagctgacaacattgtctagtgcccatcacattgaaatgagtccaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tcaattgatttagagctgacaacattgtctagtgcccatcacattgaaatgagtccaagt 376
Query: 301 gatgcaggctttcaggacagatatgttgttcaagaaatcatcaaagaaatggctaagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gatgcaggctttcaggacagatatgttgttcaagaaatcatcaaagaaatggctaagaat 436
Query: 361 agacccattgatactaaagggaagaaaggatttaaagtactagtgcttaatgacgttgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agacccattgatactaaagggaagaaaggatttaaagtactagtgcttaatgacgttgac 496
Query: 421 aagctctctagagaagctcaacattctctccgcagaacaatggagaaatacagtgcttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aagctctctagagaagctcaacattctctccgcagaacaatggagaaatacagtgcttat 556
Query: 481 tgcagattaattctatgttgcaatagttcttcaagagtcactgaagcaatccgctcccgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgcagattaattctatgttgcaatagttcttcaagagtcactgaagcaatccgctcccgt 616
Query: 541 tgtctaaatatacgaataaatgcaccaagtgaagaacagattgttgaagttatagagttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tgtctaaatatacgaataaatgcaccaagtgaagaacagattgttgaagttatagagttc 676
Query: 601 attggtaagaaagaagggctgcaaattccttctggttttgctgctcgcatagcagaaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 attggtaagaaagaagggctgcaaattccttctggttttgctgctcgcatagcagaaaaa 736
Query: 661 tcaaatcggaatttaaggagggccatattatcatttgagacttgccgtgtccaacagtat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tcaaatcggaatttaaggagggccatattatcatttgagacttgccgtgtccaacagtat 796
Query: 721 cctttcacgaacaggcaaacaattcccccaatggactgggaggaatatatttctgaaata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 cctttcacgaacaggcaaacaattcccccaatggactgggaggaatatatttctgaaata 856
Query: 781 gcatctgacataatgaaggaacagagcccaaaaaggttgtttcaagttcgagggaagctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 gcatctgacataatgaaggaacagagcccaaaaaggttgtttcaagttcgagggaagctg 916
Query: 841 tatgagcttctaattaattgcattcccccagagatgattttgaagaggcttctttttgag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 tatgagcttctaattaattgcattcccccagagatgattttgaagaggcttctttttgag 976
Query: 901 ctattgaggaaactggatgcagaactaaagcatgaagtttgtcactgggctgcatattat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 ctattgaggaaactggatgcagaactaaagcatgaagtttgtcactgggctgcatattat 1036
Query: 961 g 961
|
Sbjct: 1037 g 1037
>gnl|LJGI|TC72124 similar to UniRef100_Q84N07 Cluster: Replication factor C 38 kDa
subunit; n=1; Oryza sativa Japonica Group|Rep:
Replication factor C 38 kDa subunit - Oryza sativa
subsp. japonica (Rice), partial (62%)
Length = 778
Score = 1292 bits (652), Expect = 0.0
Identities = 655/656 (99%)
Strand = Plus / Plus
Query: 1 atgttgtgggtggacaagtaccgtcccaaaaccctagatcaggttatggtccacgacgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atgttgtgggtggacaagtaccgtcccaaaaccctagatcaggttatggtccacgacgat 182
Query: 61 gtcgctcaaaacctcaagaaattggttacggaacaggattgtccccatttgctattctat 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gtcgctcaaaaccccaagaaattggttacggaacaggattgtccccatttgctattctat 242
Query: 121 ggtccatctggttctggcaagaaaaccctaatcatggcgcttctccgccaaatgttcgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ggtccatctggttctggcaagaaaaccctaatcatggcgcttctccgccaaatgttcgga 302
Query: 181 actgctgccgaaaaggtgaaggtggaaaataggacgtggaaagtggatgctggaagtaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 actgctgccgaaaaggtgaaggtggaaaataggacgtggaaagtggatgctggaagtaga 362
Query: 241 tcaattgatttagagctgacaacattgtctagtgcccatcacattgaaatgagtccaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tcaattgatttagagctgacaacattgtctagtgcccatcacattgaaatgagtccaagt 422
Query: 301 gatgcaggctttcaggacagatatgttgttcaagaaatcatcaaagaaatggctaagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gatgcaggctttcaggacagatatgttgttcaagaaatcatcaaagaaatggctaagaat 482
Query: 361 agacccattgatactaaagggaagaaaggatttaaagtactagtgcttaatgacgttgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 agacccattgatactaaagggaagaaaggatttaaagtactagtgcttaatgacgttgac 542
Query: 421 aagctctctagagaagctcaacattctctccgcagaacaatggagaaatacagtgcttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aagctctctagagaagctcaacattctctccgcagaacaatggagaaatacagtgcttat 602
Query: 481 tgcagattaattctatgttgcaatagttcttcaagagtcactgaagcaatccgctcccgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tgcagattaattctatgttgcaatagttcttcaagagtcactgaagcaatccgctcccgt 662
Query: 541 tgtctaaatatacgaataaatgcaccaagtgaagaacagattgttgaagttatagagttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tgtctaaatatacgaataaatgcaccaagtgaagaacagattgttgaagttatagagttc 722
Query: 601 attggtaagaaagaagggctgcaaattccttctggttttgctgctcgcatagcaga 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 attggtaagaaagaagggctgcaaattccttctggttttgctgctcgcatagcaga 778