Miyakogusa Predicted Gene

Lj0g3v0101969.2
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0101969.2 Non Chatacterized Hit- tr|I1M5D8|I1M5D8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15690
PE,90.17,0,seg,NULL; WD_REPEATS_1,WD40 repeat, conserved site; no
description,WD40/YVTN repeat-like-containing ,CUFF.5776.2
         (1377 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63026 homologue to UniRef100_Q9FVD4 Cluster: Ser/Thr ...  1380   0.0  
gnl|LJGI|TC57348 similar to UniRef100_Q9FVD4 Cluster: Ser/Thr sp...  1300   0.0  
gnl|LJGI|TC62924 homologue to UniRef100_Q9FVD4 Cluster: Ser/Thr ...  1055   0.0  
gnl|LJGI|TC66424 homologue to UniRef100_Q9FVD4 Cluster: Ser/Thr ...   585   e-166
gnl|LJGI|TC62866 homologue to UniRef100_Q9FVD4 Cluster: Ser/Thr ...   103   3e-21

>gnl|LJGI|TC63026 homologue to UniRef100_Q9FVD4 Cluster: Ser/Thr specific protein
            phosphatase 2A B regulatory subunit beta isoform; n=1;
            Medicago sativa subsp. x varia|Rep: Ser/Thr specific
            protein phosphatase 2A B regulatory subunit beta isoform
            - Medicago varia (Alfalfa), partial (57%)
          Length = 1488

 Score = 1380 bits (696), Expect = 0.0
 Identities = 716/722 (99%), Gaps = 3/722 (0%)
 Strand = Plus / Plus

                                                                        
Query: 659  atgagaccagtctgttggctcgttgtcgtcgagtgtatgcacatgctcatgattatcata 718
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12   atgagaccagtctgttggctcgttgtcgtcgagtgtatgcacatgctcatgattatcata 71

                                                                        
Query: 719  tcaattctatttccaataacagcgatggcgaaactttcatatcagctgatgatttgcgaa 778
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72   tcaattctatttccaataacagcgatggcgaaactttcatatcagctgatgatttgcgaa 131

                                                                        
Query: 779  taaat---ctttggaaccttgaaattagcaaccaaagttttaatattgttgatgtaaagc 835
            | |     ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132  tgagagtgctttggaaccttgaaattagcaaccaaagttttaatattgttgatgtaaagc 191

                                                                        
Query: 836  ctgcaaatatggaggatctaactgaggttataacatcagcggaatttcaccctacacatt 895
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192  ctgcaaatatggaggatctaactgaggttataacatcagcggaatttcaccctacacatt 251

                                                                        
Query: 896  gtaatacattagcgtatagcagttcaaagggttcaattcgtctgattgacttgcggcagt 955
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252  gtaatacattagcgtatagcagttcaaagggttcaattcgtctgattgacttgcggcagt 311

                                                                        
Query: 956  cagccttatgtgattctcatgccaaactatttgaggagcaggaggccccagggtctagat 1015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312  cagccttatgtgattctcatgccaaactatttgaggagcaggaggccccagggtctagat 371

                                                                        
Query: 1016 catttttcacagagattattgcttctatctcagacataaaatttgcaaaggatggaagat 1075
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372  catttttcacagagattattgcttctatctcagacataaaatttgcaaaggatggaagat 431

                                                                        
Query: 1076 atatactcagtcgtgattatatgactctaaagttatgggacatcaacatggattcaggcc 1135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432  atatactcagtcgtgattatatgactctaaagttatgggacatcaacatggattcaggcc 491

                                                                        
Query: 1136 cagttgcaacgttccaggttcatgagtatttaaggccaaagctttgtgatttatatgaaa 1195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492  cagttgcaacgttccaggttcatgagtatttaaggccaaagctttgtgatttatatgaaa 551

                                                                        
Query: 1196 acgattcaatttttgacaagtttgagtgttgtctgagtggtgatggatcacgtgtttcaa 1255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552  acgattcaatttttgacaagtttgagtgttgtctgagtggtgatggatcacgtgtttcaa 611

                                                                        
Query: 1256 ctggttcttacagcaatctattccgtgtgtttggttgtgccccgggaagtactgaggcta 1315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612  ctggttcttacagcaatctattccgtgtgtttggttgtgccccgggaagtactgaggcta 671

                                                                        
Query: 1316 cgactttggaagccagtaaaaatccaatgaggcgacaagttccaactccttcaaggcctg 1375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672  cgactttggaagccagtaaaaatccaatgaggcgacaagttccaactccttcaaggcctg 731

              
Query: 1376 ct 1377
            ||
Sbjct: 732  ct 733


>gnl|LJGI|TC57348 similar to UniRef100_Q9FVD4 Cluster: Ser/Thr specific protein
           phosphatase 2A B regulatory subunit beta isoform; n=1;
           Medicago sativa subsp. x varia|Rep: Ser/Thr specific
           protein phosphatase 2A B regulatory subunit beta isoform
           - Medicago varia (Alfalfa), partial (42%)
          Length = 897

 Score = 1300 bits (656), Expect = 0.0
 Identities = 673/681 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaacaacggtggcgatgaggtcgtcgaagctccgccggcgggtccaccacagccgctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atgaacaacggtggcgatgaggtcgtcgaagctccgccggcgggtccaccacagccgctg 273

                                                                       
Query: 61  gattggaaattctcccaggttttcggtgaacgcacggctggggaagaggttcaggaagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gattggaaattctcccaggttttcggtgaacgcacggctggggaagaggttcaggaagtg 333

                                                                       
Query: 121 gacataatttctgctattgaatttgacaagtctggtgatcatcttgctacgggtgatcga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gacataatttctgctattgaatttgacaagtctggtgatcatcttgctacgggtgatcga 393

                                                                       
Query: 181 ggtggtcgagtagttctctttgagcgcacagatgcaaaagatcatgtttcgagaagggat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ggtggtcgagtagttctctttgagcgcacagatgcaaaagatcatgtttcgagaagggat 453

                                                                       
Query: 241 tcggagaggatggactattcaaatgttggtaggcatcctgagttccgttacaaaacagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tcggagaggatggactattcaaatgttggtaggcatcctgagttccgttacaaaacagag 513

                                                                       
Query: 301 tttcagagtcatgagcctgagtttgactatcttaagagcttggaaatagaagagaaaatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tttcagagtcatgagcctgagtttgactatcttaagagcttggaaatagaagagaaaatt 573

                                                                       
Query: 361 aacaaaatcaaatggtgccaaacagctaatggtgctctcttccttttatctacaaatgat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aacaaaatcaaatggtgccaaacagctaatggtgctctcttccttttatctacaaatgat 633

                                                                       
Query: 421 aaaacaattaaatattggaaggttcaagaaaagaaggtcnnnnnnnttactgacttgaat 480
           |||||||||||||||||||||||||||||||||||||||       ||||||||||||||
Sbjct: 634 aaaacaattaaatattggaaggttcaagaaaagaaggtcaaaaaaattactgacttgaat 693

                                                                       
Query: 481 gttgacccttcaaaagcaatgggaaatggttctattgctagttcaagtaattccagtagc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gttgacccttcaaaagcaatgggaaatggttctattgctagttcaagtaattccagtagc 753

                                                                       
Query: 541 tctaggccatatcttgcaaatggagagtctccagaaagatcgcacagttatctaagcact 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tctaggccatatcttgcaaatggagagtctccagaaagatcgcacagttatctaagcact 813

                                                                       
Query: 601 gatttctcatttccaccaggaggcataccttcgctaagattacccttggtaaccagccat 660
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 814 gatttctcatttccaccaggaggcataccttcgctaagattacccttggtgaccagccat 873

                                
Query: 661 gagaccagtctgttggctcgt 681
           |||||||||||||||||||||
Sbjct: 874 gagaccagtctgttggctcgt 894


>gnl|LJGI|TC62924 homologue to UniRef100_Q9FVD4 Cluster: Ser/Thr specific protein
           phosphatase 2A B regulatory subunit beta isoform; n=1;
           Medicago sativa subsp. x varia|Rep: Ser/Thr specific
           protein phosphatase 2A B regulatory subunit beta isoform
           - Medicago varia (Alfalfa), partial (34%)
          Length = 855

 Score = 1055 bits (532), Expect = 0.0
 Identities = 546/553 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaacaacggtggcgatgaggtcgtcgaagctccgccggcgggtccaccacagccgctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atgaacaacggtggcgatgaggtcgtcgaagctccgccggcgggtccaccacagccgctg 362

                                                                       
Query: 61  gattggaaattctcccaggttttcggtgaacgcacggctggggaagaggttcaggaagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gattggaaattctcccaggttttcggtgaacgcacggctggggaagaggttcaggaagtg 422

                                                                       
Query: 121 gacataatttctgctattgaatttgacaagtctggtgatcatcttgctacgggtgatcga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gacataatttctgctattgaatttgacaagtctggtgatcatcttgctacgggtgatcga 482

                                                                       
Query: 181 ggtggtcgagtagttctctttgagcgcacagatgcaaaagatcatgtttcgagaagggat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggtggtcgagtagttctctttgagcgcacagatgcaaaagatcatgtttcgagaagggat 542

                                                                       
Query: 241 tcggagaggatggactattcaaatgttggtaggcatcctgagttccgttacaaaacagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tcggagaggatggactattcaaatgttggtaggcatcctgagttccgttacaaaacagag 602

                                                                       
Query: 301 tttcagagtcatgagcctgagtttgactatcttaagagcttggaaatagaagagaaaatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tttcagagtcatgagcctgagtttgactatcttaagagcttggaaatagaagagaaaatt 662

                                                                       
Query: 361 aacaaaatcaaatggtgccaaacagctaatggtgctctcttccttttatctacaaatgat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 aacaaaatcaaatggtgccaaacagctaatggtgctctcttccttttatctacaaatgat 722

                                                                       
Query: 421 aaaacaattaaatattggaaggttcaagaaaagaaggtcnnnnnnnttactgacttgaat 480
           |||||||||||||||||||||||||||||||||||||||       ||||||||||||||
Sbjct: 723 aaaacaattaaatattggaaggttcaagaaaagaaggtcaaaaaaattactgacttgaat 782

                                                                       
Query: 481 gttgacccttcaaaagcaatgggaaatggttctattgctagttcaagtaattccagtagc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gttgacccttcaaaagcaatgggaaatggttctattgctagttcaagtaattccagtagc 842

                        
Query: 541 tctaggccatatc 553
           |||||||||||||
Sbjct: 843 tctaggccatatc 855


>gnl|LJGI|TC66424 homologue to UniRef100_Q9FVD4 Cluster: Ser/Thr specific protein
           phosphatase 2A B regulatory subunit beta isoform; n=1;
           Medicago sativa subsp. x varia|Rep: Ser/Thr specific
           protein phosphatase 2A B regulatory subunit beta isoform
           - Medicago varia (Alfalfa), partial (34%)
          Length = 706

 Score =  585 bits (295), Expect = e-166
 Identities = 448/500 (89%), Gaps = 6/500 (1%)
 Strand = Plus / Plus

                                                                       
Query: 37  ccggcgggtccaccacagccgctggattggaaattctcccaggttttcggtgaacgcacg 96
           |||||||||||||| || || || || |||||||||||||||||||||||||||||  ||
Sbjct: 187 ccggcgggtccaccgcaccctctcgactggaaattctcccaggttttcggtgaacgtgcg 246

                                                                       
Query: 97  gctggggaagaggttcaggaagtggacataatttctgctattgaatttgacaagtctggt 156
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 247 gctggggaagaggttcaggaagtggacataatttctgctattgaatttgacaagtctggc 306

                                                                       
Query: 157 gatcatcttgctacgggtgatcgaggtggtcgagtagttctctttgagcgcacagatgca 216
           |||||||||||||| |||||||| ||||||||||| |||||||||||| | |||||||||
Sbjct: 307 gatcatcttgctactggtgatcgtggtggtcgagtggttctctttgagaggacagatgca 366

                                                                       
Query: 217 aaagatcatgtt---tcgagaagggattcggagaggatggactattcaaatgttggtagg 273
           |||||||||| |   || |||||||||| |||||| ||||||||||| |   ||||||||
Sbjct: 367 aaagatcatggtggatcaagaagggatttggagagtatggactattcta---ttggtagg 423

                                                                       
Query: 274 catcctgagttccgttacaaaacagagtttcagagtcatgagcctgagtttgactatctt 333
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 catcctgaattccgttacaaaacagagtttcagagtcatgagcctgagtttgactatctt 483

                                                                       
Query: 334 aagagcttggaaatagaagagaaaattaacaaaatcaaatggtgccaaacagctaatggt 393
           |||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||
Sbjct: 484 aagagcttggaaattgaagagaaaatcaacaaaatcagatggtgccaaacagctaatagt 543

                                                                       
Query: 394 gctctcttccttttatctacaaatgataaaacaattaaatattggaaggttcaagaaaag 453
           || || |||||| | ||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 544 gcccttttccttctctctacaaatgataaaaccatcaaattttggaaggttcaagaaaag 603

                                                                       
Query: 454 aaggtcnnnnnnnttactgacttgaatgttgacccttcaaaagcaatgggaaatggttct 513
           ||||||       || ||||  |||||||||| |||||||||   ||||||||||| | |
Sbjct: 604 aaggtcaagaaaattgctgaaatgaatgttgatccttcaaaaaatatgggaaatggctgt 663

                               
Query: 514 attgctagttcaagtaattc 533
           ||||||||||||||||||||
Sbjct: 664 attgctagttcaagtaattc 683


>gnl|LJGI|TC62866 homologue to UniRef100_Q9FVD4 Cluster: Ser/Thr specific protein
            phosphatase 2A B regulatory subunit beta isoform; n=1;
            Medicago sativa subsp. x varia|Rep: Ser/Thr specific
            protein phosphatase 2A B regulatory subunit beta isoform
            - Medicago varia (Alfalfa), partial (16%)
          Length = 864

 Score =  103 bits (52), Expect = 3e-21
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1307 ctgaggctacgactttggaagccagtaaaaatccaatgaggcgacaagttccaactcctt 1366
            |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 4    ctgaggctacaactttagaagccagtaaaaatccaatgagacgacaagttccaacccctt 63

                    
Query: 1367 caaggcct 1374
            ||||||||
Sbjct: 64   caaggcct 71