Miyakogusa Predicted Gene
- Lj0g3v0101939.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0101939.1 Non Chatacterized Hit- tr|A5B4J2|A5B4J2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,76,0.00000000000003,ACT-like,NULL; no description,NULL,CUFF.5736.1
(1329 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77447 similar to UniRef100_A7NZ46 Cluster: Chromosome... 666 0.0
gnl|LJGI|TC68846 similar to UniRef100_A7QJF3 Cluster: Chromosome... 66 6e-10
>gnl|LJGI|TC77447 similar to UniRef100_A7NZ46 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (27%)
Length = 452
Score = 666 bits (336), Expect = 0.0
Identities = 349/352 (99%), Gaps = 1/352 (0%)
Strand = Plus / Plus
Query: 978 tttggatcctgagaagcagggtgcactctgctcacgtttgaaactggaaatgcttcatcc 1037
||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttggatcctgagaacaagggt-cactctgctcacgtttgaaactggaaatgcttcatcc 59
Query: 1038 attgcgagtcatcattgcaaaccgaggaccagatactgaactattagtcgctaatccagt 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 attgcgagtcatcattgcaaaccgaggaccagatactgaactattagtcgctaatccagt 119
Query: 1098 tgagctatctggaaagggaagacctcgagttttttatgatgctacatttgctctcaaagc 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgagctatctggaaagggaagacctcgagttttttatgatgctacatttgctctcaaagc 179
Query: 1158 acttggaatctgtgttttctcggctgaagtaggaagacattcagcatcagagcgcgaatg 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 acttggaatctgtgttttctcggctgaagtaggaagacattcagcatcagagcgcgaatg 239
Query: 1218 ggaggtctacaggttccttttggatgagaattgtgaatttcaactaacaggtgttgttgc 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggaggtctacaggttccttttggatgagaattgtgaatttcaactaacaggtgttgttgc 299
Query: 1278 tagatatcaaattgcagatagagttagaagaaccttaatgggttggtaagaa 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tagatatcaaattgcagatagagttagaagaaccttaatgggttggtaagaa 351
>gnl|LJGI|TC68846 similar to UniRef100_A7QJF3 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 1868
Score = 65.9 bits (33), Expect = 6e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 204 ctttggtctctgcattgtcaaaggagacgtttcaactgatggggtatggtgctacat 260
||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct: 352 ctttggtctgagcattgttaaaggagacgtgtcaactgatgggaaatggtgctacat 408
Score = 61.9 bits (31), Expect = 9e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 841 cacaaaggtcttctttatgacattatgagaactttgaaagacatgaatattaagatttc 899
||||||||||||||||||||||| ||||||||||| || ||| || |||||||||||
Sbjct: 983 cacaaaggtcttctttatgacatcatgagaactttcaaggactacaacattaagatttc 1041