Miyakogusa Predicted Gene

Lj0g3v0101689.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0101689.1 Non Chatacterized Hit- tr|F6GW90|F6GW90_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.65,0.000002,NAD(P)-binding Rossmann-fold domains,NULL;
GDHRDH,Glucose/ribitol dehydrogenase; SUBFAMILY NOT NAMED,CUFF.5718.1
         (501 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63326 similar to UniRef100_A7PZ77 Cluster: Chromosome...    54   8e-07
gnl|LJGI|FS339983 similar to UniRef100_A7PZ77 Cluster: Chromosom...    52   3e-06
gnl|LJGI|TC59941 weakly similar to UniRef100_A7PZ77 Cluster: Chr...    52   3e-06

>gnl|LJGI|TC63326 similar to UniRef100_A7PZ77 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (89%)
          Length = 1052

 Score = 54.0 bits (27), Expect = 8e-07
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 100 gtgctgacagcaagagatgagaaaaggggtcttgaagct 138
           ||||| ||||||||||||||||| ||||||||| |||||
Sbjct: 131 gtgctaacagcaagagatgagaagaggggtcttcaagct 169


>gnl|LJGI|FS339983 similar to UniRef100_A7PZ77 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (31%)
          Length = 738

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 97  gtggtgctgacagcaagagatgagaaaaggggtcttgaagct 138
           |||||||| |||||||||||| |||| ||||||||| |||||
Sbjct: 272 gtggtgcttacagcaagagatcagaagaggggtcttcaagct 313


>gnl|LJGI|TC59941 weakly similar to UniRef100_A7PZ77 Cluster: Chromosome chr15
           scaffold_40, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr15 scaffold_40, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (90%)
          Length = 1086

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 97  gtggtgctgacagcaagagatgagaaaaggggtcttgaagct 138
           |||||||| |||||||||||| |||| ||||||||| |||||
Sbjct: 137 gtggtgcttacagcaagagatcagaagaggggtcttcaagct 178