Miyakogusa Predicted Gene

Lj0g3v0101359.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0101359.1 Non Chatacterized Hit- tr|D7KKP9|D7KKP9_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,30.77,1e-18,GUB_WAK_bind,Wall-associated receptor kinase
galacturonan-binding domain; seg,NULL,CUFF.5690.1
         (945 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67844 similar to UniRef100_A7PCX6 Cluster: Chromosome...   519   e-147
gnl|LJGI|TC80169 UniRef100_A9XVY9 Cluster: Photosystem II CP47 c...   513   e-145

>gnl|LJGI|TC67844 similar to UniRef100_A7PCX6 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (34%)
          Length = 705

 Score =  519 bits (262), Expect = e-147
 Identities = 262/262 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcacagtcaccattgttcttccctgcccttcatcactatcatctcattttcctatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46  atgtcacagtcaccattgttcttccctgcccttcatcactatcatctcattttcctatca 105

                                                                       
Query: 61  gctttgttaatcacatcctgttcttccacccaagcaaactcatgcagaacctactgtggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gctttgttaatcacatcctgttcttccacccaagcaaactcatgcagaacctactgtggc 165

                                                                       
Query: 121 aacataacagtagattaccccttcgcaacccaatacggttgcggccaccccggcttccgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 aacataacagtagattaccccttcgcaacccaatacggttgcggccaccccggcttccgc 225

                                                                       
Query: 181 gacctcctcttctgcatcaacgatgttctcatgctccacatcgcctccggatcctacagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gacctcctcttctgcatcaacgatgttctcatgctccacatcgcctccggatcctacagg 285

                                 
Query: 241 gtactcgaaatagactacgcct 262
           ||||||||||||||||||||||
Sbjct: 286 gtactcgaaatagactacgcct 307



 Score =  517 bits (261), Expect = e-146
 Identities = 264/265 (99%)
 Strand = Plus / Plus

                                                                       
Query: 681 gcctggggattgggcctatggaattcgtgtgaggtattctgtgcagggaagtgatgagtt 740
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gcctggggattgggcctatggaattcgtgtgaggtattctgtgcagggaagtgatgagtt 363

                                                                       
Query: 741 ttgtggggcgtgtgaggccactggagggtcttgtgggtatggttcggatgggattaggca 800
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttgtggggcgtgtgaggccactggagggtcttgtgggtatggttcggatgggattaggca 423

                                                                       
Query: 801 ggtttgtatgtgtgggaatttcaattcaacctccaattgtgattcagtggggatttcggc 860
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ggtttgtatgtgtgggaatttcaattcaacctccaattgtgattcagtggggatttcggc 483

                                                                       
Query: 861 tggagcaaggcctgtgagggtgaaaatgtctgcaggattgttggcgtgtatgttagcgtg 920
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tggagcaaggcctgtgagggtgaaaatgtctgcaggattgttggcgtgtatgttagcgtg 543

                                    
Query: 921 gatgacaatcaatcagatttgaaaa 945
            ||||||||||||||||||||||||
Sbjct: 544 tatgacaatcaatcagatttgaaaa 568


>gnl|LJGI|TC80169 UniRef100_A9XVY9 Cluster: Photosystem II CP47 chlorophyll
           apoprotein; n=1; Staphylea colchica|Rep: Photosystem II
           CP47 chlorophyll apoprotein - Staphylea colchica,
           partial (22%)
          Length = 651

 Score =  513 bits (259), Expect = e-145
 Identities = 259/259 (100%)
 Strand = Plus / Plus

                                                                       
Query: 687 ggattgggcctatggaattcgtgtgaggtattctgtgcagggaagtgatgagttttgtgg 746
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ggattgggcctatggaattcgtgtgaggtattctgtgcagggaagtgatgagttttgtgg 416

                                                                       
Query: 747 ggcgtgtgaggccactggagggtcttgtgggtatggttcggatgggattaggcaggtttg 806
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ggcgtgtgaggccactggagggtcttgtgggtatggttcggatgggattaggcaggtttg 476

                                                                       
Query: 807 tatgtgtgggaatttcaattcaacctccaattgtgattcagtggggatttcggctggagc 866
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tatgtgtgggaatttcaattcaacctccaattgtgattcagtggggatttcggctggagc 536

                                                                       
Query: 867 aaggcctgtgagggtgaaaatgtctgcaggattgttggcgtgtatgttagcgtggatgac 926
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aaggcctgtgagggtgaaaatgtctgcaggattgttggcgtgtatgttagcgtggatgac 596

                              
Query: 927 aatcaatcagatttgaaaa 945
           |||||||||||||||||||
Sbjct: 597 aatcaatcagatttgaaaa 615