Miyakogusa Predicted Gene
- Lj0g3v0101339.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0101339.1 tr|Q5WFA9|Q5WFA9_BACSK Oligopeptide ABC
transporter ATP-binding protein OS=Bacillus clausii (strain
,26.87,3.2,seg,NULL,CUFF.5687.1
(270 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO012943 weakly similar to UniRef100_Q0J397 Cluster: Os... 115 1e-25
gnl|LJGI|AV410753 115 1e-25
gnl|LJGI|DC594663 similar to UniRef100_Q27900 Cluster: DNA-direc... 105 1e-22
gnl|LJGI|FS342771 88 3e-17
>gnl|LJGI|GO012943 weakly similar to UniRef100_Q0J397 Cluster: Os09g0244100 protein;
n=1; Oryza sativa Japonica Group|Rep: Os09g0244100
protein - Oryza sativa subsp. japonica (Rice), partial
(3%)
Length = 643
Score = 115 bits (58), Expect = 1e-25
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 99 gcttctgcttcacgacggagagagcttcaaacagtcatggaagtgctctatttccaccca 158
||||||| ||||||||| ||||||||||||| | ||||||||||||||||||||||||
Sbjct: 87 gcttctgattcacgacgaggagagcttcaaaccgccatggaagtgctctatttccaccct 146
Query: 159 tgctttgatccccagctcttctggctcctatcgttcaa 196
|||||||||||| | ||||| ||| |||||||||||||
Sbjct: 147 tgctttgatccctaactcttttggatcctatcgttcaa 184
>gnl|LJGI|AV410753
Length = 299
Score = 115 bits (58), Expect = 1e-25
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 99 gcttctgcttcacgacggagagagcttcaaacagtcatggaagtgctctatttccaccca 158
||||||| |||||||||| ||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 35 gcttctgattcacgacggggagagcttcgaaccgccatggaagtgctctatttccaccct 94
Query: 159 tgctttgatccccagctcttctggctcctatcgttcaa 196
|||||||||||| | ||||||| | |||||||||||||
Sbjct: 95 tgctttgatccctaactcttctagatcctatcgttcaa 132
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 243 ggagtcaagaagttccaaagtgcaggaa 270
||||||||||||||||||||||||||||
Sbjct: 236 ggagtcaagaagttccaaagtgcaggaa 263
>gnl|LJGI|DC594663 similar to UniRef100_Q27900 Cluster: DNA-directed RNA polymerase;
n=1; Euplotes octocarinatus|Rep: DNA-directed RNA
polymerase, partial (2%)
Length = 552
Score = 105 bits (53), Expect = 1e-22
Identities = 83/93 (89%)
Strand = Plus / Plus
Query: 99 gcttctgcttcacgacggagagagcttcaaacagtcatggaagtgctctatttccaccca 158
||||||| ||||||||| ||||||||||||| | ||||||||||||||||||||||||
Sbjct: 43 gcttctgattcacgacgaggagagcttcaaaccgccatggaagtgctctatttccaccct 102
Query: 159 tgctttgatccccagctcttctggctcctatcg 191
|||||||||||| | ||||| ||| ||||||||
Sbjct: 103 tgctttgatccctaactcttttggatcctatcg 135
>gnl|LJGI|FS342771
Length = 635
Score = 87.7 bits (44), Expect = 3e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 99 gcttctgcttcacgacggagagagcttcaaacagtcatggaagtgctctatttccaccca 158
||||||| |||||||||| ||||||||| ||| | ||||||||| ||||||||||||||
Sbjct: 11 gcttctgattcacgacggggagagcttcgaaccgccatggaagtcctctatttccaccct 70
Query: 159 tgctttgatccc 170
||||||||||||
Sbjct: 71 tgctttgatccc 82