Miyakogusa Predicted Gene
- Lj0g3v0101289.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0101289.1 Non Chatacterized Hit- tr|D7TS57|D7TS57_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,91.67,0,Cpn60_TCP1,Chaperonin Cpn60/TCP-1; GroEL equatorial
domain-like,Chaperonin Cpn60/TCP-1; TCOMPLEXTCP1,CUFF.5684.1
(432 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69512 homologue to UniRef100_Q1RSH3 Cluster: GroEL-li... 856 0.0
gnl|LJGI|GO011453 similar to UniRef100_P35480 Cluster: Chaperoni... 192 1e-48
>gnl|LJGI|TC69512 homologue to UniRef100_Q1RSH3 Cluster: GroEL-like chaperone,
ATPase; n=1; Medicago truncatula|Rep: GroEL-like
chaperone, ATPase - Medicago truncatula (Barrel medic),
partial (37%)
Length = 757
Score = 856 bits (432), Expect = 0.0
Identities = 432/432 (100%)
Strand = Plus / Plus
Query: 1 atgtatcgctttgccacttcccttgcctccaaagctcggattgctaggaacaccagtcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 atgtatcgctttgccacttcccttgcctccaaagctcggattgctaggaacaccagtcaa 175
Query: 61 cagattggaagtagggcggcgtggagcaggaattatgcggccaaagacattaaatttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 cagattggaagtagggcggcgtggagcaggaattatgcggccaaagacattaaatttggt 235
Query: 121 gtggaggctcgggctctgatgctgaagggtgttgaagagcttgctgatgcagtcaaagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gtggaggctcgggctctgatgctgaagggtgttgaagagcttgctgatgcagtcaaagta 295
Query: 181 accatgggccctaagggccgcaatgtggtgattgagcaaagttatggtgcccctaaagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 accatgggccctaagggccgcaatgtggtgattgagcaaagttatggtgcccctaaagtg 355
Query: 241 acaaaagatggagtaactgttgccaagagcattgaattcaaggatagagtcaagaatgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 acaaaagatggagtaactgttgccaagagcattgaattcaaggatagagtcaagaatgta 415
Query: 301 ggtgccagtcttgtaaagcaggttgcaaatgccaccaatgatgtggctggtgatggaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ggtgccagtcttgtaaagcaggttgcaaatgccaccaatgatgtggctggtgatggaacc 475
Query: 361 acatgtgctactgtccttactcgagcaatatttgcggaaggttgcaaatcagttgcagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 acatgtgctactgtccttactcgagcaatatttgcggaaggttgcaaatcagttgcagct 535
Query: 421 ggtatgaatgca 432
||||||||||||
Sbjct: 536 ggtatgaatgca 547
>gnl|LJGI|GO011453 similar to UniRef100_P35480 Cluster: Chaperonin CPN60,
mitochondrial precursor; n=1; Brassica napus|Rep:
Chaperonin CPN60, mitochondrial precursor - Brassica
napus (Rape), partial (15%)
Length = 702
Score = 192 bits (97), Expect = 1e-48
Identities = 187/215 (86%), Gaps = 4/215 (1%)
Strand = Plus / Plus
Query: 146 agggtgttgaagagcttgctgatgcagtcaaagtaaccatgggccct---aagggccgca 202
||||||||||||||||| ||||||| | |||||||||||| || ||| ||||| |||
Sbjct: 131 agggtgttgaagagcttactgatgctgccaaagtaaccattggtcctcctaaggggagca 190
Query: 203 atgtggtgattgagcaaagttatggtgcccctaaagtgacaaaagatggagtaactgttg 262
||||||||||||||| ||||| |||||| ||||||||||| ||||||||||| |||||||
Sbjct: 191 atgtggtgattgagctaagttttggtgctcctaaagtgaccaaagatggagtgactgttg 250
Query: 263 ccaagagcattgaattcaaggatagagtcaagaatgtaggtgccagtcttgtaaagcagg 322
| ||||||||||||||||||| || ||| || ||||| ||||||||||| | ||| |||
Sbjct: 251 caaagagcattgaattcaagggtaaagttaa-aatgttagtgccagtcttattaagaagg 309
Query: 323 ttgcaaatgccaccaatgatgtggctggtgatgga 357
|||||||||| | ||||||||| ||||||||||||
Sbjct: 310 ttgcaaatgcaaacaatgatgtagctggtgatgga 344