Miyakogusa Predicted Gene

Lj0g3v0101279.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0101279.1 Non Chatacterized Hit- tr|C5WXC0|C5WXC0_SORBI
Putative uncharacterized protein Sb01g018340
OS=Sorghu,42.59,2e-16,seg,NULL; Katanin_con80,NULL; KATANIN P80
SUBUNIT,Katanin p80 subunit B1,CUFF.5682.1
         (492 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70763 similar to UniRef100_A7R3U4 Cluster: Chromosome...   967   0.0  

>gnl|LJGI|TC70763 similar to UniRef100_A7R3U4 Cluster: Chromosome undetermined
           scaffold_569, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_569,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (85%)
          Length = 1195

 Score =  967 bits (488), Expect = 0.0
 Identities = 491/492 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcagactcatgatgcaacattaagtaatcttcggtcacgcttgacaaagttacaggtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atgcagactcatgatgcaacattaagtaatcttcggtcacgcttgacaaagttacaggtg 163

                                                                       
Query: 61  gtgcggcatttttgggagcgcaatgatattaaaggtgctatcaatgctttgagaaagctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gtgcggcatttttgggagcgcaatgatattaaaggtgctatcaatgctttgagaaagctg 223

                                                                       
Query: 121 ccggatcaatctgttcaagcagatgttattagtgtccttgtggaaaagatggagatcctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ccggatcaatctgttcaagcagatgttattagtgtccttgtggaaaagatggagatcctc 283

                                                                       
Query: 181 agcttggatttattttcttgcttatttcctgtgctcacaggcttgttggatagcaggaca 240
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agcttggatttatttccttgcttatttcctgtgctcacaggcttgttggatagcaggaca 343

                                                                       
Query: 241 gaaagacatgtaaaggtgtcactggatttgctgttaaagcttgtagcagtttttggtcca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gaaagacatgtaaaggtgtcactggatttgctgttaaagcttgtagcagtttttggtcca 403

                                                                       
Query: 301 acaatacgcgcaaccgtttcagcacctccctctgttggggttgatctacatcaagagcaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 acaatacgcgcaaccgtttcagcacctccctctgttggggttgatctacatcaagagcaa 463

                                                                       
Query: 361 aggcgggaatgctgcaaccagtgctttatgcaattgcaaaaaacccaaatggttcttcca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aggcgggaatgctgcaaccagtgctttatgcaattgcaaaaaacccaaatggttcttcca 523

                                                                       
Query: 421 atactgatacggaggggtggtttattggcaaagtctgccctagagctaaatctagttctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 atactgatacggaggggtggtttattggcaaagtctgccctagagctaaatctagttctt 583

                       
Query: 481 caacagtcctag 492
           ||||||||||||
Sbjct: 584 caacagtcctag 595