Miyakogusa Predicted Gene

Lj0g3v0101209.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0101209.1 tr|F2DLA7|F2DLA7_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,30,4.8,DUF868,Protein of
unknown function DUF868, plant; seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAM,CUFF.5674.1
         (687 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS330379 similar to UniRef100_A7Q2W5 Cluster: Chromosom...   113   1e-24
gnl|LJGI|TC70157 similar to UniRef100_A7Q2W5 Cluster: Chromosome...    70   2e-11
gnl|LJGI|TC58086 similar to UniRef100_A7PCQ7 Cluster: Chromosome...    64   1e-09

>gnl|LJGI|FS330379 similar to UniRef100_A7Q2W5 Cluster: Chromosome chr12 scaffold_47,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_47, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (51%)
          Length = 781

 Score =  113 bits (57), Expect = 1e-24
 Identities = 171/209 (81%)
 Strand = Plus / Plus

                                                                       
Query: 249 caagattgatgttaagccatggttcttttggaacaaaaaagggtacaaaactcttgaggt 308
           |||| |||| ||||||||||||  |||||||| ||||||||||||||||||  |||||||
Sbjct: 474 caaggttgacgttaagccatggcacttttggagcaaaaaagggtacaaaacctttgaggt 533

                                                                       
Query: 309 tgatggcaatcaaattgaagtctattgggatctcaggtcagcgagattttctgacagccc 368
           ||| || || ||  | ||  |||||||||||||  | || || | ||| || |   ||||
Sbjct: 534 tgaagggaaccaggtggagctctattgggatcttcgttccgcaaaattctccggtggccc 593

                                                                       
Query: 369 tgagccaataagtgactactatgtctctttagtgtctgatgaagaggttgtgttgttatt 428
           ||||||||  ||||||||||||||  | || || ||||||||||||||||||||||| ||
Sbjct: 594 tgagccaaacagtgactactatgtagccttggtttctgatgaagaggttgtgttgttgtt 653

                                        
Query: 429 aggatattataagaagaaagcttacaaga 457
            ||  |||| |||||||||||||||||||
Sbjct: 654 gggggattacaagaagaaagcttacaaga 682


>gnl|LJGI|TC70157 similar to UniRef100_A7Q2W5 Cluster: Chromosome chr12 scaffold_47,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_47, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 719

 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                  
Query: 632 ttgatgggattgttttgattcatgtgaagaacttacaatggaagttcagagggaa 686
           ||||||||||||| ||||||||||| |||||||| || ||||||||||| |||||
Sbjct: 1   ttgatgggattgtattgattcatgtcaagaacttgcagtggaagttcagggggaa 55


>gnl|LJGI|TC58086 similar to UniRef100_A7PCQ7 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (90%)
          Length = 1094

 Score = 63.9 bits (32), Expect = 1e-09
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 647 tgattcatgtgaagaacttacaatggaagttcagagggaa 686
           |||||||||||||| |||| ||||||||||||||||||||
Sbjct: 747 tgattcatgtgaagcacttgcaatggaagttcagagggaa 786