Miyakogusa Predicted Gene

Lj0g3v0101189.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0101189.1 tr|B9GFW3|B9GFW3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_752856 PE=4
SV=1,27.83,4e-18,seg,NULL; coiled-coil,NULL,CUFF.5673.1
         (3255 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68424 weakly similar to UniRef100_A7Q2W8 Cluster: Chr...  1023   0.0  

>gnl|LJGI|TC68424 weakly similar to UniRef100_A7Q2W8 Cluster: Chromosome chr12
            scaffold_47, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (12%)
          Length = 893

 Score = 1023 bits (516), Expect = 0.0
 Identities = 519/520 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2736 taacttgaataatgtgaatatcaggaagacctttccaaatatggatgctttttctgcatt 2795
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    taacttgaataatgtgaatatcaggaagacctttccaaatatggatgctttttctgcatt 60

                                                                        
Query: 2796 tctgtttgtcttgaatcctcataccaataagaaatgccctggtcaaatcagtttggcaca 2855
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61   tctgtttgtcttgaatcctcataccaataagaaatgccttggtcaaatcagtttggcaca 120

                                                                        
Query: 2856 agaaacacagataacaagttcacttataagtaatttgctatatgtggctgaggaggttca 2915
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  agaaacacagataacaagttcacttataagtaatttgctatatgtggctgaggaggttca 180

                                                                        
Query: 2916 attagctcagatagagattagaaacttggtccatgccaagttctattctcgctcagttca 2975
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  attagctcagatagagattagaaacttggtccatgccaagttctattctcgctcagttca 240

                                                                        
Query: 2976 tcagcttgatttgcagctattattcattgacttttgtagtgggaagaaggtgcaagtgac 3035
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tcagcttgatttgcagctattattcattgacttttgtagtgggaagaaggtgcaagtgac 300

                                                                        
Query: 3036 tcttgatatgacatgcttaaaatgtggggcttatcctgtggaggtccttccatgtcaaat 3095
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  tcttgatatgacatgcttaaaatgtggggcttatcctgtggaggtccttccatgtcaaat 360

                                                                        
Query: 3096 acatgatccctctgctagcggggaacaaaagcctcttcctgcatcgcttgtagataaaat 3155
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  acatgatccctctgctagcggggaacaaaagcctcttcctgcatcgcttgtagataaaat 420

                                                                        
Query: 3156 aacaactgcagctgtgaatgagagagttgggttttcaagaattattaggctttgtaagtg 3215
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  aacaactgcagctgtgaatgagagagttgggttttcaagaattattaggctttgtaagtg 480

                                                    
Query: 3216 tatttccaaggcagtccaggatagcactcaaagcggatga 3255
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  tatttccaaggcagtccaggatagcactcaaagcggatga 520