Miyakogusa Predicted Gene

Lj0g3v0101129.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0101129.2 tr|G7LDT6|G7LDT6_MEDTR Replication factor A
protein OS=Medicago truncatula GN=MTR_8g062030 PE=4
SV=1,41.41,6e-18,DUF223,Domain of unknown function DUF223,CUFF.5668.2
         (345 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO023390                                                      50   9e-06
gnl|LJGI|TC77623                                                       50   9e-06

>gnl|LJGI|GO023390 
          Length = 753

 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 229 ttagttgatatgttgggtatactgactgcaacttctgaggagaggacatatgtgaaggat 288
           |||||||||||| | ||| |  |||| || || |||||||| ||||| ||||| ||||||
Sbjct: 421 ttagttgatatgattggtttgttgacagctacctctgaggaaaggacttatgtcaaggat 480

                                                    
Query: 289 ggaattgtgactaagctgatgctgttggaaattagtgatga 329
           |  ||||| || ||| ||||| || | ||||||||||||||
Sbjct: 481 gacattgttacaaagatgatgttgcttgaaattagtgatga 521


>gnl|LJGI|TC77623 
          Length = 1247

 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 1   atgttccgtaaatgggctgagttatttgttgaaggaaatgt 41
           ||||||||||||||||||||   ||||||||| ||||||||
Sbjct: 166 atgttccgtaaatgggctgacaaatttgttgagggaaatgt 206