Miyakogusa Predicted Gene
- Lj0g3v0100909.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0100909.1 Non Chatacterized Hit- tr|C4J4K6|C4J4K6_MAIZE
Uncharacterized protein OS=Zea mays PE=4
SV=1,57.97,0.14,coiled-coil,NULL; seg,NULL,CUFF.5656.1
(408 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS339892 similar to UniRef100_A7Q1L3 Cluster: Chromosom... 521 e-147
gnl|LJGI|TC67196 similar to UniRef100_A7Q1L3 Cluster: Chromosome... 143 1e-33
>gnl|LJGI|FS339892 similar to UniRef100_A7Q1L3 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (48%)
Length = 718
Score = 521 bits (263), Expect = e-147
Identities = 263/263 (100%)
Strand = Plus / Minus
Query: 1 atgatgttgaatcagatgggtggagggatgccggtggcggagggagtaccgaggaggcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 atgatgttgaatcagatgggtggagggatgccggtggcggagggagtaccgaggaggcta 349
Query: 61 gcctgctggagctcgaggtcgttgagctgctgctcgcggtccatctcgatgatgagcggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gcctgctggagctcgaggtcgttgagctgctgctcgcggtccatctcgatgatgagcggc 289
Query: 121 acgacgaggatgaggaaggaggtgccgacgatccaagcggccttgccggtgctcttgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 acgacgaggatgaggaaggaggtgccgacgatccaagcggccttgccggtgctcttgaga 229
Query: 181 agcttcttggcgacgaagccggcgtcgccggcgactagccttcctcgggagacgatgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 agcttcttggcgacgaagccggcgtcgccggcgactagccttcctcgggagacgatgggg 169
Query: 241 gagcgtgagatcctggagatgat 263
|||||||||||||||||||||||
Sbjct: 168 gagcgtgagatcctggagatgat 146
Score = 226 bits (114), Expect = 8e-59
Identities = 114/114 (100%)
Strand = Plus / Minus
Query: 295 ttgcttggcctgtctgggagagacactccacctcttcggccttgcgacgccatggatgga 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ttgcttggcctgtctgggagagacactccacctcttcggccttgcgacgccatggatgga 55
Query: 355 tcggagttggagagagtcgagtcgaaaatggctgcagcgacaccaggtagctag 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tcggagttggagagagtcgagtcgaaaatggctgcagcgacaccaggtagctag 1
>gnl|LJGI|TC67196 similar to UniRef100_A7Q1L3 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 573
Score = 143 bits (72), Expect = 1e-33
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 40 gagggagtaccgaggaggctagcctgctggagctcgaggtcgttgagctgctgctcgcgg 99
||||| || ||||||| ||||||||| ||| |||||| ||||||| ||||||||| |||
Sbjct: 292 gagggggttccgaggatgctagcctgttgggactcgagctcgttgatctgctgctcacgg 233
Query: 100 tccatctcgatgatgagcggcacgacgaggatgaggaaggaggtgccgacgatccaagcg 159
||||| ||| || ||| || |||||||||| |||||||| ||| ||||||||||| |||
Sbjct: 232 tccatggcgacgacgagaggaacgacgaggacgaggaaggtggttccgacgatccacgcg 173
Query: 160 gccttgccggtgctcttgagaagcttcttggcgacgaagccggcgtcg 207
|||||||||||||| ||| |||||||||||||||||| ||||||||
Sbjct: 172 gccttgccggtgctgcggaggagcttcttggcgacgaaggcggcgtcg 125