Miyakogusa Predicted Gene

Lj0g3v0100899.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0100899.1 Non Chatacterized Hit- tr|I1L444|I1L444_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,46.67,2e-19,LTP_2,Bifunctional inhibitor/plant lipid transfer
protein/seed storage helical domain; no descriptio,gene.g7666.t1.1
         (387 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58997 similar to UniRef100_Q9FX48 Cluster: Non-specif...   666   0.0  

>gnl|LJGI|TC58997 similar to UniRef100_Q9FX48 Cluster: Non-specific lipid-transfer
           protein; n=1; Arabidopsis thaliana|Rep: Non-specific
           lipid-transfer protein - Arabidopsis thaliana (Mouse-ear
           cress), partial (18%)
          Length = 827

 Score =  666 bits (336), Expect = 0.0
 Identities = 386/408 (94%), Gaps = 21/408 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcagaagctgcttccttgccaaccatttttgaaatccccaaacaaccctcctccttcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atgcagaagctgcttccttgccaaccatttttgaaatccccaaacaaccctcctccttcc 303

                                                                       
Query: 61  tgctgtgttcccttgaatgagatggcaaccaatgaggtagattgtctttgtagtgttatg 120
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tgctgtgttcccctgaatgagatggcaaccaatgaggtagattgtctttgtagtgttatg 363

                                                                       
Query: 121 aacaatcctcagctgctcctgtcgatcaatgtttctaaggaagatgccatgaagctccct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aacaatcctcagctgctcctgtcgatcaatgtttctaaggaagatgccatgaagctccct 423

                                                                       
Query: 181 ggggcttgtgatatagaagttgatatttctaagtgcaacagcac---------------- 224
           ||||||||||||||||||||||||||||||||||||||||||||                
Sbjct: 424 ggggcttgtgatatagaagttgatatttctaagtgcaacagcacaggagcaagctcatca 483

                                                                       
Query: 225 -----agattcaagctcatcatcacaagatgataccacaattcctgatgaagaaacttct 279
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 actcaagattcaagctcatcatcacaagatgataccacaattcctgatgaagaaacttct 543

                                                                       
Query: 280 gaagattcaacaagttcaacaaacatgatttctccatatggaatcatgtctcttggtgtt 339
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gaagattcaacaagttcaacaaacatgatttctccatatggaatcatgtctcttggtgtt 603

                                                           
Query: 340 cctggctttgttgctttgtcgactgctctagtattttcttcgtactag 387
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 cctggctttgttgctttgtcgactgctctagtattttcttcgtactag 651