Miyakogusa Predicted Gene

Lj0g3v0100699.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0100699.1 Non Chatacterized Hit- tr|G7IEB7|G7IEB7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,49.27,0,ZF_PHD_2,Zinc finger, PHD-finger; GNAT,GNAT domain;
seg,NULL; DNA binding domain with preference for,CUFF.5643.1
         (4011 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC593206 weakly similar to UniRef100_Q9FG53 Cluster: Gb...   575   e-163
gnl|LJGI|TC79294                                                      280   7e-74
gnl|LJGI|TC68143 similar to UniRef100_A7NWM7 Cluster: Chromosome...    56   2e-06

>gnl|LJGI|DC593206 weakly similar to UniRef100_Q9FG53 Cluster: Gb|AAC80581.1; n=1;
            Arabidopsis thaliana|Rep: Gb|AAC80581.1 - Arabidopsis
            thaliana (Mouse-ear cress), partial (4%)
          Length = 587

 Score =  575 bits (290), Expect = e-163
 Identities = 290/290 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1549 cggtcacttcttgaggaggggaaaacaagtgttgtggtcagggatcataagcgacacaag 1608
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298  cggtcacttcttgaggaggggaaaacaagtgttgtggtcagggatcataagcgacacaag 357

                                                                        
Query: 1609 acacaaaacaagaagcgatgtggtctgttggttcgcaatgctaaggaagaggtagattca 1668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358  acacaaaacaagaagcgatgtggtctgttggttcgcaatgctaaggaagaggtagattca 417

                                                                        
Query: 1669 gaaactgatggatatgttccatacagtggtaaaagaactttgcttgcctggatgattgat 1728
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418  gaaactgatggatatgttccatacagtggtaaaagaactttgcttgcctggatgattgat 477

                                                                        
Query: 1729 tcgggcacagtcctccagaatgggaaggtccattatgttcaacctggacggaaatttgat 1788
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478  tcgggcacagtcctccagaatgggaaggtccattatgttcaacctggacggaaatttgat 537

                                                              
Query: 1789 ggtaagatcacaggagatggcattcattgtggctgctgcaataagattct 1838
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538  ggtaagatcacaggagatggcattcattgtggctgctgcaataagattct 587



 Score =  470 bits (237), Expect = e-131
 Identities = 237/237 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1253 ggaagacacattggtcaatcaccttggcctacaataggctcaaaatgctttatgaagctg 1312
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ggaagacacattggtcaatcaccttggcctacaataggctcaaaatgctttatgaagctg 60

                                                                        
Query: 1313 gtgatggtgaagggaaagtctacgggccaggtttcaaatttacaccaataccagaggagg 1372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gtgatggtgaagggaaagtctacgggccaggtttcaaatttacaccaataccagaggagg 120

                                                                        
Query: 1373 aaatcaattcactaaccagaatagttaccaagacaagaaatgataagtccaagccaagaa 1432
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aaatcaattcactaaccagaatagttaccaagacaagaaatgataagtccaagccaagaa 180

                                                                     
Query: 1433 aagataaatctgggccacttgggcgaaagggtggaaagacagttgatggagtcaata 1489
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aagataaatctgggccacttgggcgaaagggtggaaagacagttgatggagtcaata 237


>gnl|LJGI|TC79294 
          Length = 493

 Score =  280 bits (141), Expect = 7e-74
 Identities = 153/157 (97%)
 Strand = Plus / Plus

                                                                        
Query: 3855 cactattcctgacgatcagcctgagatgaaagaatctgcagagctagctgagcctgattt 3914
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    cactattcctgacgatcagcctgagatgaaagaatctgcagagctagctgagcctgattt 60

                                                                        
Query: 3915 gcaggttgatcaaactgcacggagcgacgccccatcctcgtgtcacccttcttgtggtag 3974
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61   gcaggttgatcaaactgcacggagcgacgccccatcctcgtgtcccccttcttgtggtag 120

                                                 
Query: 3975 tactgaaaggagagttctttcaaaccaagtcagttga 4011
            ||||||||||||||||||||| |||| |||| |||||
Sbjct: 121  tactgaaaggagagttctttccaacccagtccgttga 157


>gnl|LJGI|TC68143 similar to UniRef100_A7NWM7 Cluster: Chromosome chr5 scaffold_2,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_2, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (13%)
          Length = 622

 Score = 56.0 bits (28), Expect = 2e-06
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2032 tgtggagatggtggagacctgatctgttgtgatggttgcccatcaacttttcatcaaagc 2091
            ||||||||||| || ||  | ||||| |||||||| || |||||||| |||||||| |||
Sbjct: 3    tgtggagatggaggtgatttaatctgctgtgatggctgtccatcaacatttcatcagagc 62

                        
Query: 2092 tgcttggatata 2103
            ||| ||||||||
Sbjct: 63   tgcctggatata 74