Miyakogusa Predicted Gene

Lj0g3v0100679.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0100679.1 Non Chatacterized Hit- tr|I1GGR3|I1GGR3_AMPQE
Uncharacterized protein OS=Amphimedon queenslandica
PE,32,0.0001,RRM,RNA recognition motif domain; no
description,Nucleotide-binding, alpha-beta plait; RRM_1,RNA
rec,CUFF.5639.1
         (387 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS331941 homologue to UniRef100_Q5A2S7 Cluster: Potenti...   617   e-176

>gnl|LJGI|FS331941 homologue to UniRef100_Q5A2S7 Cluster: Potential actin-binding
           protein; n=1; Candida albicans|Rep: Potential
           actin-binding, partial (2%)
          Length = 432

 Score =  617 bits (311), Expect = e-176
 Identities = 314/315 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctgtttttcgatgggatatctagagtggtgggctattctcagattaaggctttgttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atgctgtttttcgatgggatatctagagtggtgggctattctcagattaaggctttgttt 177

                                                                       
Query: 61  tctcaaattgggaggttagggaaggtgttcgtgaagcgtcaacgcaagattgggcggcga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tctcaaattgggaggttagggaaggtgttcgtgaagcgtcaacgcaagattgggcggcga 237

                                                                       
Query: 121 tttcgcttcgggttcatgcgattcatggcaagggatcacgccgaggcggcggtatctaaa 180
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 238 tttcgcttcgggttcatgcgattcatggcaagggatcacgacgaggcggcggtatctaaa 297

                                                                       
Query: 181 ctcaatgggcttaaggtcggtggggctcatatttcggtgtcgatggaaggttccctcagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ctcaatgggcttaaggtcggtggggctcatatttcggtgtcgatggaaggttccctcagt 357

                                                                       
Query: 241 caagagctttgtctactcgaaagcttggcttgggggtttcaactgcgagtcagagagaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 caagagctttgtctactcgaaagcttggcttgggggtttcaactgcgagtcagagagaga 417

                          
Query: 301 ccttcgctgattcgc 315
           |||||||||||||||
Sbjct: 418 ccttcgctgattcgc 432