Miyakogusa Predicted Gene
- Lj0g3v0100659.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0100659.1 Non Chatacterized Hit- tr|F6H7R5|F6H7R5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.96,2e-16,seg,NULL; NB-ARC,NB-ARC; no description,NULL;
DISEASERSIST,Disease resistance protein; OS11G0674500 ,CUFF.5640.1
(1242 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP042422 similar to UniRef100_Q6YIA0 Cluster: Disease r... 791 0.0
gnl|LJGI|TC66893 weakly similar to UniRef100_Q6YIA0 Cluster: Dis... 200 1e-50
gnl|LJGI|TC62110 similar to UniRef100_Q6YIA0 Cluster: Disease re... 137 2e-31
gnl|LJGI|AV425544 similar to UniRef100_A7R3R8 Cluster: Chromosom... 66 6e-10
>gnl|LJGI|BP042422 similar to UniRef100_Q6YIA0 Cluster: Disease resistance
protein-like protein MsR1; n=1; Medicago sativa|Rep:
Disease resistance protein-like protein MsR1 - Medicago
sativa (Alfalfa), partial (3%)
Length = 526
Score = 791 bits (399), Expect = 0.0
Identities = 405/407 (99%)
Strand = Plus / Plus
Query: 1 atggctgacgtagcccaactcgcttttcttacattacacctggatccacccagagaagaa 60
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 120 atggctgacgtagctcaactcgcttttcttacattacacttggatccacccagagaagaa 179
Query: 61 atcaagacccttatcagagaaaaagatgcaggggaaggggacaagtgtctctgttgggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atcaagacccttatcagagaaaaagatgcaggggaaggggacaagtgtctctgttgggga 239
Query: 121 aactttatctctttgcttcaactctgtgtgaacaagctttgtcataataataaagatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aactttatctctttgcttcaactctgtgtgaacaagctttgtcataataataaagatgat 299
Query: 181 ttcttaaatgttgatggtgaaaagcaagctcaaatggctaatgatgtgaaggacacactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttcttaaatgttgatggtgaaaagcaagctcaaatggctaatgatgtgaaggacacactt 359
Query: 241 tacaaggttagaggatttcttgagcttattagcaaagaggattttgagcagaaatttagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tacaaggttagaggatttcttgagcttattagcaaagaggattttgagcagaaatttagt 419
Query: 301 ggagcacccattaagcgtccttatggtgttccagcaaaccctgaattcactgttggggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ggagcacccattaagcgtccttatggtgttccagcaaaccctgaattcactgttggggtg 479
Query: 361 gatgtgccgttgaataagttgaaggtggagcttctcaaagatggtac 407
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gatgtgccgttgaataagttgaaggtggagcttctcaaagatggtac 526
>gnl|LJGI|TC66893 weakly similar to UniRef100_Q6YIA0 Cluster: Disease resistance
protein-like protein MsR1; n=1; Medicago sativa|Rep:
Disease resistance protein-like protein MsR1 - Medicago
sativa (Alfalfa), partial (37%)
Length = 830
Score = 200 bits (101), Expect = 1e-50
Identities = 194/225 (86%)
Strand = Plus / Plus
Query: 960 gcctaatgggttgtggcagaagacattgaaggaactgtcactggatcattctatacttga 1019
|||| ||| |||||||||||| | | ||||||||||||||| | ||||||| |||||||
Sbjct: 3 gccttatgagttgtggcagaaaatagtgaaggaactgtcacaaggtcattctgtacttga 62
Query: 1020 ttctaatactgaattacttacccaattccaaaagatcttagatgttttacaagataatcc 1079
|||| ||||||| |||||||| | |||||||||||||||||||| ||||||||||
Sbjct: 63 ttctcatactgagttacttactcgcctccaaaagatcttagatgttgcggaagataatcc 122
Query: 1080 catcatcaaggagtgcttcatggacctagcattattccctgaagaccaaagaattcctgt 1139
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 123 tgtcatcaaggagtgcttcatggacttagcattatttcctgaagaccaaagaattcctgc 182
Query: 1140 tgcttctctcattgatatgtgggccgagttgtatggactagatga 1184
| || ||||||||||||| ||||| | ||||||| |||||||||
Sbjct: 183 tactgctctcattgatatctgggcagcattgtatgaactagatga 227
>gnl|LJGI|TC62110 similar to UniRef100_Q6YIA0 Cluster: Disease resistance
protein-like protein MsR1; n=1; Medicago sativa|Rep:
Disease resistance protein-like protein MsR1 - Medicago
sativa (Alfalfa), partial (12%)
Length = 935
Score = 137 bits (69), Expect = 2e-31
Identities = 117/133 (87%)
Strand = Plus / Plus
Query: 442 gggaaaaccactttggctacaaagctttgtttggatgaacaaatcaagggtaaattcagg 501
|||||||| ||||||||| ||| | |||||| |||| ||||||| |||||||| ||||||
Sbjct: 801 gggaaaacaactttggctgcaatggtttgttgggataaacaaattaagggtaagttcagg 860
Query: 502 ggaaatattttgtttgttaccttctcaaaaacgcccaacttgaagaatattgtggagaga 561
| ||||||||| ||||| || ||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 861 gaaaatattttatttgtaacattctcgaaaacgcccaacgtgaagaatattgtagagaga 920
Query: 562 ttatttgaacact 574
||||||||||||
Sbjct: 921 ctatttgaacact 933
Score = 75.8 bits (38), Expect = 6e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 52 agagaagaaatcaagacccttatcagagaaaaagatgcaggggaag 97
|||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 420 agagaagaaatcaaaaccctcatcagagaaaaagatgcaggggaag 465
>gnl|LJGI|AV425544 similar to UniRef100_A7R3R8 Cluster: Chromosome undetermined
scaffold_560, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_560, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(12%)
Length = 425
Score = 65.9 bits (33), Expect = 6e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 1087 aaggagtgcttcatggacctagcattattccctgaagaccaaagaattcctgttgcttct 1146
||||||||||||||||| |||| |||| |||||||||||||| || |||||| || |
Sbjct: 16 aaggagtgcttcatggatctagggctatttcctgaagaccaaaggatccctgttactgcc 75
Query: 1147 ctcattgatatgtgggc 1163
|| ||||||||||||||
Sbjct: 76 cttattgatatgtgggc 92