Miyakogusa Predicted Gene
- Lj0g3v0099909.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0099909.1 CUFF.5612.1
(978 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74872 similar to UniRef100_A2Q370 Cluster: Glycoside ... 632 0.0
gnl|LJGI|TC75056 similar to UniRef100_A2Q370 Cluster: Glycoside ... 260 1e-68
gnl|LJGI|TC76405 weakly similar to UniRef100_A2Q370 Cluster: Gly... 155 6e-37
gnl|LJGI|AV413823 similar to UniRef100_A7P3T4 Cluster: Chromosom... 101 8e-21
gnl|LJGI|AV768339 similar to UniRef100_A7P3T4 Cluster: Chromosom... 78 1e-13
>gnl|LJGI|TC74872 similar to UniRef100_A2Q370 Cluster: Glycoside hydrolase, family
17; Virulence factor, pectin lyase fold; X8; n=1;
Medicago truncatula|Rep: Glycoside hydrolase, family 17;
Virulence factor, pectin lyase fold; X8 - Medicago
truncatula (Barrel medic), partial (21%)
Length = 521
Score = 632 bits (319), Expect = 0.0
Identities = 319/319 (100%)
Strand = Plus / Plus
Query: 660 tcaaccatgctatgaaccagacaatgtgatttcacatgcaagttatgcttttgacagtta 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcaaccatgctatgaaccagacaatgtgatttcacatgcaagttatgcttttgacagtta 60
Query: 720 ctatcataagatgggaaacactcctgattcatgtgacttcaagggagtggcaacaatcac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctatcataagatgggaaacactcctgattcatgtgacttcaagggagtggcaacaatcac 120
Query: 780 cacctctgatccaagtcatggttcttgtaaatttccaggaagtcttggcaaaaatggcac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cacctctgatccaagtcatggttcttgtaaatttccaggaagtcttggcaaaaatggcac 180
Query: 840 ctttggtaacttcactgctccatcaatgaactcaagttcagattcttcagcctacaacct 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctttggtaacttcactgctccatcaatgaactcaagttcagattcttcagcctacaacct 240
Query: 900 ccagagctgtgaaatgagagctagaaaccttctaatggtgacaggatttcttctgatggg 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccagagctgtgaaatgagagctagaaaccttctaatggtgacaggatttcttctgatggg 300
Query: 960 actagttttgatgtaaagg 978
|||||||||||||||||||
Sbjct: 301 actagttttgatgtaaagg 319
>gnl|LJGI|TC75056 similar to UniRef100_A2Q370 Cluster: Glycoside hydrolase, family
17; Virulence factor, pectin lyase fold; X8; n=1;
Medicago truncatula|Rep: Glycoside hydrolase, family 17;
Virulence factor, pectin lyase fold; X8 - Medicago
truncatula (Barrel medic), partial (42%)
Length = 688
Score = 260 bits (131), Expect = 1e-68
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 1 atgaattcagttttggtcccgattctcgatttcctccaatcctctggctcttatctcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atgaattcagttttggtcccgattctcgatttcctccaatcctctggctcttatctcatg 617
Query: 61 ctcaacatttacccttactatgattacatgcaatcaaatggtgtgattccattagattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ctcaacatttacccttactatgattacatgcaatcaaatggtgtgattccattagattat 677
Query: 121 gcactcttcaa 131
|||||||||||
Sbjct: 678 gcactcttcaa 688
>gnl|LJGI|TC76405 weakly similar to UniRef100_A2Q370 Cluster: Glycoside hydrolase,
family 17; Virulence factor, pectin lyase fold; X8; n=1;
Medicago truncatula|Rep: Glycoside hydrolase, family 17;
Virulence factor, pectin lyase fold; X8 - Medicago
truncatula (Barrel medic), partial (13%)
Length = 474
Score = 155 bits (78), Expect = 6e-37
Identities = 153/178 (85%)
Strand = Plus / Plus
Query: 692 cacatgcaagttatgcttttgacagttactatcataagatgggaaacactcctgattcat 751
||||||||| |||||||||||||| |||||||||| |||||||||| ||||||| ||||
Sbjct: 5 cacatgcaaattatgcttttgacacttactatcatcagatgggaaagtctcctgagtcat 64
Query: 752 gtgacttcaagggagtggcaacaatcaccacctctgatccaagtcatggttcttgtaaat 811
|| | ||||| | |||| |||||||||||||| |||||||||||||||| |||| ||
Sbjct: 65 gtaatttcaatcaaatggctacaatcaccacctcaaatccaagtcatggttcctgtatat 124
Query: 812 ttccaggaagtcttggcaaaaatggcacctttggtaacttcactgctccatcaatgaa 869
|||||||||||||||| ||||||||||||||| || ||||||| |||||| ||||
Sbjct: 125 ttccaggaagtcttgggcaaaatggcacctttgccaatgtcactgcaccatcactgaa 182
>gnl|LJGI|AV413823 similar to UniRef100_A7P3T4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 382
Score = 101 bits (51), Expect = 8e-21
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 277 tggccctcaaaaggcgactccgacgagcctgatgcaactgtggacaatgctaatacttac 336
|||||||||||||||||||| ||||| |||||||| | || |||||||| ||||||
Sbjct: 102 tggccctcaaaaggcgactcatctgagccggatgcaaccattgataatgctaacacttac 161
Query: 337 aacagcaatttgatccagcatgtgattaacaaaactggaacccccaaacaccctggaatt 396
||||| || |||||| ||||| ||||||| || ||||| || |||||||| ||||||
Sbjct: 162 aacagtaacttgatcagacatgttcttaacaatacaggaactccgaaacacccgggaatt 221
Query: 397 gctgttagtacttacatctatgagctctacaatga 431
|| |||||||| ||||| |||||||| ||||||||
Sbjct: 222 gcagttagtacatacatttatgagctttacaatga 256
>gnl|LJGI|AV768339 similar to UniRef100_A7P3T4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 576
Score = 77.8 bits (39), Expect = 1e-13
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 790 ccaagtcatggttcttgtaaatttccaggaagtcttggcaaaaatggcacc 840
||||||||||||||||||| |||||||||||||| ||| ||||||||||||
Sbjct: 394 ccaagtcatggttcttgtatatttccaggaagtcatggtaaaaatggcacc 344
Score = 58.0 bits (29), Expect = 1e-07
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 610 gattgggcatgtggccctggcaaggtggaatgttcttcattgctgcagggtcaaccatgc 669
|||||||| ||||| || || ||||| || ||||| | ||||||||||||||||||||
Sbjct: 574 gattgggcttgtggaccagggaaggttgattgttcccctttgctgcagggtcaaccatgt 515
Query: 670 tatgaaccagacaatgt 686
|||||||||| |||||
Sbjct: 514 catgaaccagataatgt 498