Miyakogusa Predicted Gene
- Lj0g3v0099839.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0099839.2 Non Chatacterized Hit- tr|A3C5M6|A3C5M6_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,57.14,0.00000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; MHD2,Mammalian uncoordinated homology 13, domain
2;,CUFF.5606.2
(953 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63633 similar to UniRef100_A7NXG2 Cluster: Chromosome... 644 0.0
gnl|LJGI|TC74982 similar to UniRef100_A7NXG2 Cluster: Chromosome... 446 e-124
>gnl|LJGI|TC63633 similar to UniRef100_A7NXG2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 699
Score = 644 bits (325), Expect = 0.0
Identities = 325/325 (100%)
Strand = Plus / Minus
Query: 1 atgcttcccccactaaccagatgcaaccgtgactcaaagttcaccaagctgtggaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atgcttcccccactaaccagatgcaaccgtgactcaaagttcaccaagctgtggaagaaa 267
Query: 61 gctgctccatgtggcgctaattttcaagacctgcatcacatgaagggggcatttgaaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gctgctccatgtggcgctaattttcaagacctgcatcacatgaagggggcatttgaaggc 207
Query: 121 caccatcctcggtcctcaactagccgcggaacgcaacgcctctacgttcgtctcaacacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 caccatcctcggtcctcaactagccgcggaacgcaacgcctctacgttcgtctcaacacc 147
Query: 181 ttgcactacctcctcactcacatccactcccttgaaaaatcgatctccatgaacccgggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ttgcactacctcctcactcacatccactcccttgaaaaatcgatctccatgaacccgggc 87
Query: 241 attgtcccttcaaaccgcctccgcttcgcaaacaaccgcagggctcaaagcaattcctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 attgtcccttcaaaccgcctccgcttcgcaaacaaccgcagggctcaaagcaattcctac 27
Query: 301 ttcgaaagtgtcaacctctccattc 325
|||||||||||||||||||||||||
Sbjct: 26 ttcgaaagtgtcaacctctccattc 2
>gnl|LJGI|TC74982 similar to UniRef100_A7NXG2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 509
Score = 446 bits (225), Expect = e-124
Identities = 262/270 (97%), Gaps = 4/270 (1%)
Strand = Plus / Plus
Query: 1 atgcttcccccactaaccagatgcaaccgtgactcaaagttcaccaagctgtggaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgcttcccccactaaccagatgcaaccgtgactcaaagttcaccaagctgtggaagaaa 300
Query: 61 gctgctccatgtggcgctaattttcaagacctgcatcacatgaagggggcatttgaaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctgctccatgtggcgctaattttcaagacctgcatcacatgaagggggcatttgaaggc 360
Query: 121 caccatcctcggtcctcaactagccgcggaacgcaa-cgcctctacgtt-cgtc-tcaac 177
||||||||| |||||||||||||||||||||||||| |||||||||||| |||| |||||
Sbjct: 361 caccatccttggtcctcaactagccgcggaacgcaaccgcctctacgttccgtcttcaac 420
Query: 178 accttgcactacctcctcactcacatccactcccttgaaaaatcgatctccatgaacccg 237
||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||
Sbjct: 421 accttgcactacctcctcactcacatccactcccttgaaaantcnatctccntgaacccg 480
Query: 238 ggcattgtcccttcaaaccgcctccgcttc 267
|||||||| |||||||||||||||||||||
Sbjct: 481 ggcattgt-ccttcaaaccgcctccgcttc 509