Miyakogusa Predicted Gene

Lj0g3v0099799.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0099799.1 CUFF.5603.1
         (1182 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP065804 similar to UniRef100_A7NXG2 Cluster: Chromosom...   109   4e-23

>gnl|LJGI|BP065804 similar to UniRef100_A7NXG2 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (13%)
          Length = 492

 Score =  109 bits (55), Expect = 4e-23
 Identities = 288/366 (78%)
 Strand = Plus / Plus

                                                                       
Query: 12  agcagacactataattctaccattggaactgctgcgccatctaaagccttcagaattcag 71
           |||||| || ||||| || || |||||||| || ||||| ||||| ||||||||||||||
Sbjct: 112 agcagaaacgataatcctccccttggaactccttcgccacctaaaaccttcagaattcag 171

                                                                       
Query: 72  tgattcccaagagtaccacaattggcagaagagacagctcaagattcttgaagcagggct 131
             || |||| ||||||||    ||||| ||||| ||||| ||||| |||||||| |||||
Sbjct: 172 caatccccatgagtaccatttatggcaaaagaggcagcttaagatccttgaagccgggct 231

                                                                       
Query: 132 tctcctgaacccatcaatccctttagataagagcaacacattcgccacgcgcctcaggga 191
            ||   | |||| ||||| ||| |||| || | ||||||||| |||| |  |||||||||
Sbjct: 232 cctgtngcacccttcaattcctgtagagaaaaacaacacatttgccatgaacctcaggga 291

                                                                       
Query: 192 cattataaccagttctgagtccaaaccaattgacattggcaaaaactcagacaccatgag 251
           |||||| | |||| ||||     ||||  | |||| | |||||| |||||| ||||||||
Sbjct: 292 cattattaacagtgctgaacttcaacctctagacactagcaaaacctcagaaaccatgag 351

                                                                       
Query: 252 gacactttgcaattctgtggtttccttgtcatggagaagccacaatggcactcccactga 311
            ||  |  ||||  | |||||||| |||||   ||||||||  ||||||| ||||||| |
Sbjct: 352 aaccttcagcaacgccgtggtttcgttgtcgatgagaagccctaatggcattcccactaa 411

                                                                       
Query: 312 tgtatgccactgggctgatggattccctttcaacattcacctctacacttcccttcttca 371
            || ||||| |||||| |||||| |||| |||| ||||||||||||| ||| ||||||||
Sbjct: 412 cgtttgccattgggctaatggataccctgtcaatattcacctctacatttctcttcttca 471

                 
Query: 372 gtcgat 377
            |||||
Sbjct: 472 atcgat 477