Miyakogusa Predicted Gene
- Lj0g3v0099699.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0099699.1 tr|D7LLJ2|D7LLJ2_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_669681
PE,44.8,0.00000000000002,DUF827,Protein of unknown function DUF827,
plant; seg,NULL; coiled-coil,NULL; SUBFAMILY NOT NAMED,NU,CUFF.5601.1
(1734 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61353 similar to UniRef100_A7Q3T2 Cluster: Chromosome... 1203 0.0
gnl|LJGI|TC75491 similar to UniRef100_A7Q3T2 Cluster: Chromosome... 507 e-143
gnl|LJGI|TC64296 similar to UniRef100_A7Q3T2 Cluster: Chromosome... 240 2e-62
gnl|LJGI|FS322597 similar to UniRef100_A7Q3T2 Cluster: Chromosom... 101 1e-20
>gnl|LJGI|TC61353 similar to UniRef100_A7Q3T2 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 852
Score = 1203 bits (607), Expect = 0.0
Identities = 607/607 (100%)
Strand = Plus / Plus
Query: 1 atggccgaggctgatgaatccaccgccgccgccgccgcatttggggttcccggaacgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atggccgaggctgatgaatccaccgccgccgccgccgcatttggggttcccggaacgcct 305
Query: 61 gctatcagggaagcgagacccgagacggggacccgtaggattgatacagggttcgggtcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gctatcagggaagcgagacccgagacggggacccgtaggattgatacagggttcgggtcg 365
Query: 121 ggtgggaacccgattcatggggttaggagggtgaatctgcgagctgaaattgatacgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggtgggaacccgattcatggggttaggagggtgaatctgcgagctgaaattgatacgtct 425
Query: 181 ccgccttttgagtcggttaaggaggccgtgacccgtttcggtggtagcgggccttggtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ccgccttttgagtcggttaaggaggccgtgacccgtttcggtggtagcgggccttggtta 485
Query: 241 cccctttacaggcttggagaggcttttgacaatttggaagattttgacataaagaaagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cccctttacaggcttggagaggcttttgacaatttggaagattttgacataaagaaagtg 545
Query: 301 gaggaacaagcagcagagttggagaaggatttgatagtcagagaacttgaaacacttgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gaggaacaagcagcagagttggagaaggatttgatagtcagagaacttgaaacacttgat 605
Query: 361 gtacttgaagagctgggagctaccaaaaggatcgtggaggaattaaagcagcaactacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gtacttgaagagctgggagctaccaaaaggatcgtggaggaattaaagcagcaactacaa 665
Query: 421 aaagatgcgttgaaatgcttggcgactccagatatcaactcttgtgaacagattggaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 aaagatgcgttgaaatgcttggcgactccagatatcaactcttgtgaacagattggaact 725
Query: 481 ccagttattaaggagatgaataaggaaaattatggaaacattgtcagcaatcaagaacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ccagttattaaggagatgaataaggaaaattatggaaacattgtcagcaatcaagaacag 785
Query: 541 atgttacacatttctagctcctgctctatgtcatcacctgatctgatcttgatggagttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 atgttacacatttctagctcctgctctatgtcatcacctgatctgatcttgatggagttg 845
Query: 601 aaagaag 607
|||||||
Sbjct: 846 aaagaag 852
>gnl|LJGI|TC75491 similar to UniRef100_A7Q3T2 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 602
Score = 507 bits (256), Expect = e-143
Identities = 292/304 (96%)
Strand = Plus / Plus
Query: 1431 accaactagagcaaacaatgatccaaagcctgttttaaggcccacaatttcaatgagaga 1490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaactagagcaaacaatgatccaaagcctgttttaaggcccacaatttcaatgagaga 60
Query: 1491 tgtacttagcagaaagcaagttcctgaaggatatgatacaagaaaagagatggaagagca 1550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtacttagcagaaagcaagttcctgaaggatatgatacaagaaaagagatggaagagca 120
Query: 1551 cactgaaagacaaaaggtagcattgagtcaaatgctccgtgcattgagggaagatctaac 1610
||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 121 cactgaaagaccaaaggtagcattgagtccaatgctccgtgccttgagggaagatctaac 180
Query: 1611 tgttccaccgaaagccgaaaaagacgggagtgatcaaaagcagttcgtagcacagaggaa 1670
|||||| ||| |||||||||||||||||||||||| ||||| ||| ||||||||||||||
Sbjct: 181 tgttcccccggaagccgaaaaagacgggagtgatccaaagccgtttgtagcacagaggaa 240
Query: 1671 gaagtttggattcatccaaatatcattcccattggcaaagccaagtaagaaaaaggcatg 1730
||||||||||||||||| |||||||||||| ||||| ||||| |||||||||||||||||
Sbjct: 241 gaagtttggattcatcccaatatcattccccttggccaagcccagtaagaaaaaggcatg 300
Query: 1731 aaat 1734
||||
Sbjct: 301 aaat 304
>gnl|LJGI|TC64296 similar to UniRef100_A7Q3T2 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 2220
Score = 240 bits (121), Expect = 2e-62
Identities = 250/293 (85%)
Strand = Plus / Plus
Query: 115 gggtcgggtgggaacccgattcatggggttaggagggtgaatctgcgagctgaaattgat 174
|||||||||||||||||| || ||| |||| |||||| | || ||||||||||||||
Sbjct: 328 gggtcgggtgggaacccgggtccggggattagaagggtgggtttgagagctgaaattgat 387
Query: 175 acgtctccgccttttgagtcggttaaggaggccgtgacccgtttcggtggtagcgggcct 234
||| | |||| |||| ||| || |||||||||||||| ||||| || || |||||||||
Sbjct: 388 acgacggcgccgtttgggtctgtgaaggaggccgtgactcgttttggaggaagcgggcct 447
Query: 235 tggttacccctttacaggcttggagaggcttttgacaatttggaagattttgacataaag 294
||| | |||||||||| ||||||||| |||| | ||| | | ||||| |||||||||||
Sbjct: 448 tggattcccctttacaagcttggagaagcttataacagtattgaagaccttgacataaag 507
Query: 295 aaagtggaggaacaagcagcagagttggagaaggatttgatagtcagagaacttgaaaca 354
|||||||||||||||||||| ||||||| |||||||||||||| | |||||||||||||
Sbjct: 508 aaagtggaggaacaagcagcgaagttggaaaaggatttgatagtgaaagaacttgaaaca 567
Query: 355 cttgatgtacttgaagagctgggagctaccaaaaggatcgtggaggaattaaa 407
|||||||| || |||||||||||||||||||||| ||| || || ||||||||
Sbjct: 568 cttgatgtgctcgaagagctgggagctaccaaaacgattgtcgaagaattaaa 620
Score = 129 bits (65), Expect = 6e-29
Identities = 209/255 (81%), Gaps = 9/255 (3%)
Strand = Plus / Plus
Query: 1478 tttcaatgagagatgtacttagcagaaagcaagttcctgaaggatatgatacaagaaaag 1537
||||||||||||||||||| |||||||||||||||||||||| ||| | ||| ||| |
Sbjct: 1652 tttcaatgagagatgtactcagcagaaagcaagttcctgaagaatacactgcaacaaagg 1711
Query: 1538 agatggaagagcacactgaaagacaaaaggtagcattgagtcaaatgctccgtgcattga 1597
|||||||||||| | |||||| || |||||||||||||||||||| || |||||||
Sbjct: 1712 agatggaagagcgcggtgaaagc---aacgtagcattgagtcaaatgcttcgagcattga 1768
Query: 1598 gggaagatctaactgttccaccgaaagccgaaaaagacgggagtgatcaaaagcagttcg 1657
||||||||| |||| || | ||| || || || |||| |||||| ||||||||
Sbjct: 1769 gggaagatccaactcccacagccaaacatgacaatgataggagcgatcaacagcagttc- 1827
Query: 1658 tagcacagaggaagaagtttggattcatccaaatatcattcccattggcaaagccaagta 1717
|| ||||||||||||||||||||||||||||||| ||||||||| ||||| ||| |
Sbjct: 1828 ----ac-gaggaagaagtttggattcatccaaatatcactcccattgggaaagcgaagga 1882
Query: 1718 agaaaaaggcatgaa 1732
| |||| ||||||||
Sbjct: 1883 ataaaagggcatgaa 1897
Score = 117 bits (59), Expect = 2e-25
Identities = 116/135 (85%)
Strand = Plus / Plus
Query: 1209 tattttgaagaagctgaaggaagcatcagaagaagttctacacagcaaagaagtattggc 1268
||||||||| || || |||||||| ||||||||||||| ||||||||| |||| |||
Sbjct: 1413 tattttgaaaaaaatggaggaagcagcagaagaagttctccacagcaaaaaagtcttgag 1472
Query: 1269 agatgctttaaacagaattgagtctgcaaacagaaagcaacgtgctgctgaggaggctct 1328
||| ||||||||||| ||||| |||||||||||||||| |||||||| || ||||||||
Sbjct: 1473 agaggctttaaacagcattgaaactgcaaacagaaagcagcgtgctgcggaagaggctct 1532
Query: 1329 acggcgatggattcc 1343
|||| | ||||||||
Sbjct: 1533 acggagctggattcc 1547
Score = 101 bits (51), Expect = 1e-20
Identities = 102/119 (85%)
Strand = Plus / Plus
Query: 929 atggattcagtgttaagacagccgagatgaggttgcttgcggctaaaaagatggaagaag 988
||||||| ||| ||||||| ||||||||||||| | | || |||||||||||||||||||
Sbjct: 1133 atggatttagtattaagaccgccgagatgaggtggttggcagctaaaaagatggaagaag 1192
Query: 989 ctgcaagggcagctgaagctattgctcttgctgaaatcaaggctctatctggtgctgag 1047
| || | |||||| ||||| | ||||||||||| |||||||||||||| ||||||||
Sbjct: 1193 cagctatggcagcagaagccgtcgctcttgctgagatcaaggctctatcaagtgctgag 1251
Score = 63.9 bits (32), Expect = 3e-09
Identities = 152/192 (79%)
Strand = Plus / Plus
Query: 564 ctctatgtcatcacctgatctgatcttgatggagttgaaagaagccaaagtaaatcttgg 623
||||| |||||| ||||| || |||| |||||||| ||| |||| ||| || |||||
Sbjct: 759 ctctacgtcatcgcctgacttgctcttaatggagtttaaacaagcgaaacagaaccttgg 818
Query: 624 tcaaactataaatgaactcgaggtgattcaatcctctgttgaatcgttaaataagaaaat 683
||||||||||||| || | |||||| ||||| ||||||||| | || || ||||| |
Sbjct: 819 caaaactataaatgatctaggggtgatacaatcttctgttgaaactttgaacaagaagct 878
Query: 684 gaagaaggataaaagttttcttgagagaactcgtgcaaagctagcgtcaaagtttgcagc 743
||||||||| | | ||||||||||| || |||| || || || || |||||||||||
Sbjct: 879 gaagaaggagagattgtttcttgagaggacacgtgagaatcttgcatcgaagtttgcagc 938
Query: 744 tgtctctgctca 755
| ||||||||||
Sbjct: 939 tatctctgctca 950
>gnl|LJGI|FS322597 similar to UniRef100_A7Q3T2 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 622
Score = 101 bits (51), Expect = 1e-20
Identities = 126/151 (83%)
Strand = Plus / Plus
Query: 115 gggtcgggtgggaacccgattcatggggttaggagggtgaatctgcgagctgaaattgat 174
|||||||||||||||||| || ||| |||| |||||| | || ||||||||||||||
Sbjct: 349 gggtcgggtgggaacccgggtccggggattagaagggtgggtttgagagctgaaattgat 408
Query: 175 acgtctccgccttttgagtcggttaaggaggccgtgacccgtttcggtggtagcgggcct 234
||| | |||| |||| ||| || |||||||||||||| ||||| || || |||||||||
Sbjct: 409 acgacggcgccgtttgggtctgtgaaggaggccgtgactcgttttggaggaagcgggcct 468
Query: 235 tggttacccctttacaggcttggagaggctt 265
||| | |||||||||| ||||||||| ||||
Sbjct: 469 tggattcccctttacaagcttggagaagctt 499