Miyakogusa Predicted Gene

Lj0g3v0099669.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0099669.1 tr|Q2HTU1|Q2HTU1_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_4g0,83.01,0,EMB2654 (EMBRYO DEFECTIVE 2654),NULL; FAMILY NOT
NAMED,NULL; seg,NULL; TPR-like,NULL; coiled-coil,NU,CUFF.5592.1
         (2205 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79479 homologue to UniRef100_Q2HTU1 Cluster: Tetratri...   694   0.0  

>gnl|LJGI|TC79479 homologue to UniRef100_Q2HTU1 Cluster: Tetratricopeptide-like
            helical; n=1; Medicago truncatula|Rep:
            Tetratricopeptide-like helical - Medicago truncatula
            (Barrel medic), partial (13%)
          Length = 350

 Score =  694 bits (350), Expect = 0.0
 Identities = 350/350 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1253 ctgtgacatatgatactttcatatggaaattctgtaaagaagggaagatatcatcagcct 1312
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ctgtgacatatgatactttcatatggaaattctgtaaagaagggaagatatcatcagcct 60

                                                                        
Query: 1313 tacgtgtcttaaaggatatggagagaaatggttgcagcaagactcttcaaacctataatt 1372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tacgtgtcttaaaggatatggagagaaatggttgcagcaagactcttcaaacctataatt 120

                                                                        
Query: 1373 cattgatcttgggcttaggaagtaaagggcaaatatttgaaatgtatggattgatggatg 1432
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  cattgatcttgggcttaggaagtaaagggcaaatatttgaaatgtatggattgatggatg 180

                                                                        
Query: 1433 agatgagagaaagagggatatgtccagatatttgcacttacaataatgtaattagttgtc 1492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  agatgagagaaagagggatatgtccagatatttgcacttacaataatgtaattagttgtc 240

                                                                        
Query: 1493 tttgtgaaggaggaaaaacagaggatgctacttctcttttacatgaaatgttggataagg 1552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tttgtgaaggaggaaaaacagaggatgctacttctcttttacatgaaatgttggataagg 300

                                                              
Query: 1553 gcatatctcccaatatatcttccttcaaaatactgattaaatcctgctgc 1602
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gcatatctcccaatatatcttccttcaaaatactgattaaatcctgctgc 350