Miyakogusa Predicted Gene

Lj0g3v0099219.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0099219.1 tr|K0KTJ7|K0KTJ7_9ASCO Transcription initiation
factor TFIID subunit 5 OS=Wickerhamomyces ciferrii
G,39.83,1e-16,LISH,LisH dimerisation motif; TFIID_90kDa,TFIID subunit,
WD40-associated region; SUBFAMILY NOT NAMED,CUFF.5613.1
         (372 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58844 similar to UniRef100_A7P5W9 Cluster: Chromosome...   737   0.0  

>gnl|LJGI|TC58844 similar to UniRef100_A7P5W9 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (23%)
          Length = 772

 Score =  737 bits (372), Expect = 0.0
 Identities = 372/372 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatgaagatgaaatcgtcggatacgtgactgcgtacttgaagaagaaagggtttacg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atggatgaagatgaaatcgtcggatacgtgactgcgtacttgaagaagaaagggtttacg 195

                                                                       
Query: 61  cagactgagaaggttttccaggaagagtttcagcacaacaagaacaccaccaccaccgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 cagactgagaaggttttccaggaagagtttcagcacaacaagaacaccaccaccaccgtc 255

                                                                       
Query: 121 gaacctgacattgccaaccaccttcaagctctttctcaattggagactggtcctgctagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gaacctgacattgccaaccaccttcaagctctttctcaattggagactggtcctgctagg 315

                                                                       
Query: 181 tttcacgatggatatagcgggcttagaacatggacttactcttcactggatttgtacaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tttcacgatggatatagcgggcttagaacatggacttactcttcactggatttgtacaag 375

                                                                       
Query: 241 catgagttgcttcgtgtgctttatccagtgtttatacattgctttatggatcttgttgca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 catgagttgcttcgtgtgctttatccagtgtttatacattgctttatggatcttgttgca 435

                                                                       
Query: 301 aaagggcatattcaggaagctcggaattttttcaatgccttccgtgaagaccatgaaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aaagggcatattcaggaagctcggaattttttcaatgccttccgtgaagaccatgaaatg 495

                       
Query: 361 atgcacttgcgt 372
           ||||||||||||
Sbjct: 496 atgcacttgcgt 507