Miyakogusa Predicted Gene

Lj0g3v0099099.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0099099.1 tr|G7JCP8|G7JCP8_MEDTR Tir-nbs-lrr resistance
protein OS=Medicago truncatula GN=MTR_4g080330 PE=4 SV,58.57,2e-17,no
description,NULL; Toll/Interleukin receptor TIR
domain,Toll/interleukin-1 receptor homology (TIR),CUFF.5551.1
         (499 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68060 weakly similar to UniRef100_Q19PI9 Cluster: TIR...   361   3e-99

>gnl|LJGI|TC68060 weakly similar to UniRef100_Q19PI9 Cluster: TIR-NBS-LRR type
           disease resistance protein; n=1; Populus
           trichocarpa|Rep: TIR-NBS-LRR type disease resistance
           protein - Populus trichocarpa (Western balsam poplar)
           (Populus balsamiferasubsp. trichocarpa), partial (15%)
          Length = 731

 Score =  361 bits (182), Expect = 3e-99
 Identities = 398/470 (84%)
 Strand = Plus / Plus

                                                                       
Query: 14  aaatccaaagcagctcttcatctcaaactatatggaaatatgacgtgtttctaagtttta 73
           |||||||||||||||||||| |||  |  |||||||||||||| |||||| | || ||||
Sbjct: 98  aaatccaaagcagctcttcaactccgatgatatggaaatatgatgtgtttgtgagcttta 157

                                                                       
Query: 74  gaggtgaagacactagaaacaacttcactgatcatctttttggcgctctttatgaaaaag 133
           ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||
Sbjct: 158 gaggtgaagacacaagaaacaacttcactgatcatctttttggtgctctctatggaaaag 217

                                                                       
Query: 134 gctttgttatattcaaggatgacataaagctcacaaaaggaggagatatattcactgagc 193
           |||||||||  ||||| |||||||  | ||| | ||||||   | |||||| ||||||||
Sbjct: 218 gctttgttactttcaaagatgacaccatgctaagaaaaggtaaaaatatatccactgagc 277

                                                                       
Query: 194 ttctacaagcaattgaagaatcccaaattttgattgtggtcttctcaaaaaattatgctt 253
           || ||||||||||||||| ||| |||||| |||||||||||||||||||| | |||||||
Sbjct: 278 ttatacaagcaattgaaggatcacaaattctgattgtggtcttctcaaaatactatgctt 337

                                                                       
Query: 254 cttccaaatggtgcttgcaagaacttgcaaagattgctgattgcattaacgtacaaggac 313
           |||||| |||||||||||||||||| ||||| ||||||||||||||| | | | |  | |
Sbjct: 338 cttccacatggtgcttgcaagaactggcaaaaattgctgattgcattgaaggaaagaggc 397

                                                                       
Query: 314 aaaaagttctgcctattttctatgatgtgaatccatctgatgtgagaagacaaagtggaa 373
           | |  ||||||||| |||||| |||||||| ||||||||| ||| | | |||||| ||||
Sbjct: 398 agactgttctgcctgttttctgtgatgtgactccatctgaggtgcggaaacaaagcggaa 457

                                                                       
Query: 374 attatgaaaaagccttcgtgaagcatgaagaaagattcaaagatcatatagagatgattc 433
           |||||| | |||| ||  |||||||||||||||||||||||||  || || | ||| |||
Sbjct: 458 attatggagaagcttttctgaagcatgaagaaagattcaaagaagatttacaaatggttc 517

                                                             
Query: 434 aaacatggagggaagctctatcacaagtagctagtctctctggttgggat 483
           ||| ||||||| |||||||| ||||||| ||   ||||||||| ||||||
Sbjct: 518 aaagatggaggaaagctctagcacaagtggccgatctctctggatgggat 567