Miyakogusa Predicted Gene
- Lj0g3v0098349.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0098349.1 Non Chatacterized Hit- tr|I1JKE3|I1JKE3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.31934
PE,90.53,0,RPN7,26S proteasome, regulatory subunit Rpn7;
PCI,Proteasome component (PCI) domain; no description,,CUFF.5498.1
(1242 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58111 similar to UniRef100_A7PXZ3 Cluster: Chromosome... 2462 0.0
gnl|LJGI|GO008640 similar to UniRef100_A7PXZ3 Cluster: Chromosom... 1227 0.0
gnl|LJGI|TC71815 similar to UniRef100_P45432 Cluster: COP9 signa... 1007 0.0
gnl|LJGI|TC80845 similar to UniRef100_Q9FVN4 Cluster: RCOP11 pro... 850 0.0
gnl|LJGI|GO005216 similar to UniRef100_A7PXZ3 Cluster: Chromosom... 168 5e-41
gnl|LJGI|DC595814 similar to UniRef100_A7Q6V7 Cluster: Chromosom... 101 1e-20
gnl|LJGI|TC65888 similar to UniRef100_A7QF57 Cluster: Chromosome... 90 4e-17
gnl|LJGI|TC61515 52 8e-06
>gnl|LJGI|TC58111 similar to UniRef100_A7PXZ3 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1627
Score = 2462 bits (1242), Expect = 0.0
Identities = 1242/1242 (100%)
Strand = Plus / Plus
Query: 1 atgagcggcgaccagctcgacatcgaggcgtacgcagggctttactcggggcgcacgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 atgagcggcgaccagctcgacatcgaggcgtacgcagggctttactcggggcgcacgaag 244
Query: 61 atcatgcggcttctcttcatcgccgatgccaacaagaaccccacggtgcagcttgaggcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 atcatgcggcttctcttcatcgccgatgccaacaagaaccccacggtgcagcttgaggcg 304
Query: 121 cttcgcatggcctatgatgagattaagaagggtgagaacacccatctcttcagggaagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cttcgcatggcctatgatgagattaagaagggtgagaacacccatctcttcagggaagtc 364
Query: 181 gtgaagaagatcgatggcaagttgggacctaactacaacatggattcggcttggtgcgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtgaagaagatcgatggcaagttgggacctaactacaacatggattcggcttggtgcgat 424
Query: 241 gcgtttgatcgtagggctgagcagaagagggagaagcttgaaaacgaactcaatgcatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gcgtttgatcgtagggctgagcagaagagggagaagcttgaaaacgaactcaatgcatat 484
Query: 301 aggacgaacctgattaaagaaagcataagaatgggatacaatgatttaggagacttttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aggacgaacctgattaaagaaagcataagaatgggatacaatgatttaggagacttttac 544
Query: 361 tatgcccatggtcaattaggggatgcttttaaaagttatgtccgtacccgggattattgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tatgcccatggtcaattaggggatgcttttaaaagttatgtccgtacccgggattattgc 604
Query: 421 actacatcaaagcacatcatccatatgtgtatgagtgcaattttggtcagcattgagatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 actacatcaaagcacatcatccatatgtgtatgagtgcaattttggtcagcattgagatg 664
Query: 481 ggtcaattttctcatgtctcaagctatgttagcaaggcagaacagacacctgagggcctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ggtcaattttctcatgtctcaagctatgttagcaaggcagaacagacacctgagggcctt 724
Query: 541 gacccaataacagtttccaagctacgatgtgctgcaggcttagcaaatctggaggccaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gacccaataacagtttccaagctacgatgtgctgcaggcttagcaaatctggaggccaaa 784
Query: 601 aagtataagcttgctgctcgaaagtttctagaaacaggcccagaactggttaatcactac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 aagtataagcttgctgctcgaaagtttctagaaacaggcccagaactggttaatcactac 844
Query: 661 aatgaagtaattgcacctcaagatgttgcaacatatgggggactttgtgcacttgcaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 aatgaagtaattgcacctcaagatgttgcaacatatgggggactttgtgcacttgcaaca 904
Query: 721 tttgatcgggcagagttgaaggcgaaagttattgacaattccaactttcggaatttctta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tttgatcgggcagagttgaaggcgaaagttattgacaattccaactttcggaatttctta 964
Query: 781 gagttagtacctgaagtaagggaactggtaaatgatttttactcgagccactatgcttca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 gagttagtacctgaagtaagggaactggtaaatgatttttactcgagccactatgcttca 1024
Query: 841 tgtctggaataccttgggaacctcaaagcaaacctattgcttgatatacatttgcatgac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 tgtctggaataccttgggaacctcaaagcaaacctattgcttgatatacatttgcatgac 1084
Query: 901 catgttgagacactttatgatcaaattcgtcacaaagctcttatccagtatacactccca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 catgttgagacactttatgatcaaattcgtcacaaagctcttatccagtatacactccca 1144
Query: 961 tttgtgtctgttgatttgaacatgatggctgacgcattcaaaacaactgttgttggactt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 tttgtgtctgttgatttgaacatgatggctgacgcattcaaaacaactgttgttggactt 1204
Query: 1021 cagaaagaacttgaagcattgattactgataatcagatacaggctcgaattgattcacac 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 cagaaagaacttgaagcattgattactgataatcagatacaggctcgaattgattcacac 1264
Query: 1081 aacaaaattttgtatgcacggcatgctgatcagaggaatgctaccttccaaagggttcta 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 aacaaaattttgtatgcacggcatgctgatcagaggaatgctaccttccaaagggttcta 1324
Query: 1141 gataccggaagggaatttgatcgtgatgttcgttccatgttactgagagcaaatcttatc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 gataccggaagggaatttgatcgtgatgttcgttccatgttactgagagcaaatcttatc 1384
Query: 1201 aagcatgatcacaaccttagggcattaaggaaactttgattc 1242
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1385 aagcatgatcacaaccttagggcattaaggaaactttgattc 1426
>gnl|LJGI|GO008640 similar to UniRef100_A7PXZ3 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 752
Score = 1227 bits (619), Expect = 0.0
Identities = 669/691 (96%), Gaps = 21/691 (3%)
Strand = Plus / Plus
Query: 552 agtttccaagctacgatgtgctgcaggcttagcaaatctggaggccaaaaagtataagct 611
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtttccaagctacgatgtgctgcaggcttagcaaatctggaggccaaaaa--------- 52
Query: 612 tgctgctcgaaagtttctagaaacaggcccagaactggttaatcactacaatgaagtaat 671
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ------------gtttctagaaacaggcccagaactggttaatcactacaatgaagtaat 100
Query: 672 tgcacctcaagatgttgcaacatatgggggactttgtgcacttgcaacatttgatcgggc 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 tgcacctcaagatgttgcaacatatgggggactttgtgcacttgcaacatttgatcgggc 160
Query: 732 agagttgaaggcgaaagttattgacaattccaactttcggaatttcttagagttagtacc 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 agagttgaaggcgaaagttattgacaattccaactttcggaatttcttagagttagtacc 220
Query: 792 tgaagtaagggaactggtaaatgatttttactcgagccactatgcttcatgtctggaata 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tgaagtaagggaactggtaaatgatttttactcgagccactatgcttcatgtctggaata 280
Query: 852 ccttgggaacctcaaagcaaacctattgcttgatatacatttgcatgaccatgttgagac 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ccttgggaacctcaaagcaaacctattgcttgatatacatttgcatgaccatgttgagac 340
Query: 912 actttatgatcaaattcgtcacaaagctcttatccagtatacactcccatttgtgtctgt 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 actttatgatcaaattcgtcacaaagctcttatccagtatacactcccatttgtgtctgt 400
Query: 972 tgatttgaacatgatggctgacgcattcaaaacaactgttgttggacttcagaaagaact 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tgatttgaacatgatggctgacgcattcaaaacaactgttgttggacttcagaaagaact 460
Query: 1032 tgaagcattgattactgataatcagatacaggctcgaattgattcacacaacaaaatttt 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tgaagcattgattactgataatcagatacaggctcgaattgattcacacaacaaaatttt 520
Query: 1092 gtatgcacggcatgctgatcagaggaatgctaccttccaaagggttctagataccggaag 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gtatgcacggcatgctgatcagaggaatgctaccttccaaagggttctagataccggaag 580
Query: 1152 ggaatttgatcgtgatgttcgttccatgttactgagagcaaatcttatcaagcatgatca 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ggaatttgatcgtgatgttcgttccatgttactgagagcaaatcttatcaagcatgatca 640
Query: 1212 caaccttagggcattaaggaaactttgattc 1242
||||||||||||||||| |||||||||||||
Sbjct: 641 caaccttagggcattaaagaaactttgattc 671
>gnl|LJGI|TC71815 similar to UniRef100_P45432 Cluster: COP9 signalosome complex
subunit 1; n=1; Arabidopsis thaliana|Rep: COP9
signalosome complex subunit 1 - Arabidopsis thaliana
(Mouse-ear cress), partial (37%)
Length = 732
Score = 1007 bits (508), Expect = 0.0
Identities = 508/508 (100%)
Strand = Plus / Plus
Query: 1 atgagcggcgaccagctcgacatcgaggcgtacgcagggctttactcggggcgcacgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 atgagcggcgaccagctcgacatcgaggcgtacgcagggctttactcggggcgcacgaag 284
Query: 61 atcatgcggcttctcttcatcgccgatgccaacaagaaccccacggtgcagcttgaggcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atcatgcggcttctcttcatcgccgatgccaacaagaaccccacggtgcagcttgaggcg 344
Query: 121 cttcgcatggcctatgatgagattaagaagggtgagaacacccatctcttcagggaagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cttcgcatggcctatgatgagattaagaagggtgagaacacccatctcttcagggaagtc 404
Query: 181 gtgaagaagatcgatggcaagttgggacctaactacaacatggattcggcttggtgcgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gtgaagaagatcgatggcaagttgggacctaactacaacatggattcggcttggtgcgat 464
Query: 241 gcgtttgatcgtagggctgagcagaagagggagaagcttgaaaacgaactcaatgcatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gcgtttgatcgtagggctgagcagaagagggagaagcttgaaaacgaactcaatgcatat 524
Query: 301 aggacgaacctgattaaagaaagcataagaatgggatacaatgatttaggagacttttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 aggacgaacctgattaaagaaagcataagaatgggatacaatgatttaggagacttttac 584
Query: 361 tatgcccatggtcaattaggggatgcttttaaaagttatgtccgtacccgggattattgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tatgcccatggtcaattaggggatgcttttaaaagttatgtccgtacccgggattattgc 644
Query: 421 actacatcaaagcacatcatccatatgtgtatgagtgcaattttggtcagcattgagatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 actacatcaaagcacatcatccatatgtgtatgagtgcaattttggtcagcattgagatg 704
Query: 481 ggtcaattttctcatgtctcaagctatg 508
||||||||||||||||||||||||||||
Sbjct: 705 ggtcaattttctcatgtctcaagctatg 732
>gnl|LJGI|TC80845 similar to UniRef100_Q9FVN4 Cluster: RCOP11 protein; n=1; Oryza
sativa|Rep: RCOP11 protein - Oryza sativa (Rice), partial
(32%)
Length = 645
Score = 850 bits (429), Expect = 0.0
Identities = 444/449 (98%), Gaps = 5/449 (1%)
Strand = Plus / Plus
Query: 794 aagtaagggaactggtaaatgatttttactcgagccactatgcttcatgtctggaatacc 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtaagggaactggtaaatgatttttactcgagccactatgcttcatgtctggaatacc 60
Query: 854 ttgggaacctcaaagcaaacctattgcttgatatacatttgcatgaccatgttgagacac 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgggaacctcaaagcaaacctattgcttgatatacatttgcatgaccatgttgagacac 120
Query: 914 tttatgatcaaattcgtcacaaagctcttatccagtatacactcccatttgtgtctgttg 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttatgatcaaattcgtcacaaagctcttatccagtatacactcccatttgtgtctgttg 180
Query: 974 atttgaacatgatggctgacgcattcaaaacaactgttgttggacttcagaaagaacttg 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atttgaacatgatggctgacgcattcaaaacaactgttgttggacttcagaaagaacttg 240
Query: 1034 aagcattgattactgataatcagatacaggctcgaattgattcacacaacaaaattttgt 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagcattgattactgataatcagatacaggctcgaattgattcacacaacaaaattttgt 300
Query: 1094 atgcacggcatgctgatcagaggaatgctaccttccaaagggttctagataccggaaggg 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgcacggcatgctgatcagaggaatgctaccttccaaagggttctagataccggaaggg 360
Query: 1154 aatttgatcgtgatgttcgttccatgttactgagagcaaatcttatcaagcatgatcaca 1213
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 a-----atcgtgatgttcgttccatgttactgagagcaaatcttatcaagcatgatcaca 415
Query: 1214 accttagggcattaaggaaactttgattc 1242
|||||||||||||||||||||||||||||
Sbjct: 416 accttagggcattaaggaaactttgattc 444
>gnl|LJGI|GO005216 similar to UniRef100_A7PXZ3 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 710
Score = 168 bits (85), Expect = 5e-41
Identities = 106/113 (93%)
Strand = Plus / Plus
Query: 56 cgaagatcatgcggcttctcttcatcgccgatgccaacaagaaccccacggtgcagcttg 115
||||||||||||||||||||||||||| |||| | ||||||||||| ||| |||||||||
Sbjct: 47 cgaagatcatgcggcttctcttcatcgtcgatacaaacaagaacccgacgatgcagcttg 106
Query: 116 aggcgcttcgcatggcctatgatgagattaagaagggtgagaacacccatctc 168
||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 107 aggcgcttctcatggcctatgatgagattaagaagggcgagaacacccatctc 159
>gnl|LJGI|DC595814 similar to UniRef100_A7Q6V7 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 549
Score = 101 bits (51), Expect = 1e-20
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 62 tcatgcggcttctcttcatcgccgatgccaacaagaaccccacggtgcagcttgaggcgc 121
||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 137 tcatgcggcttcttttcatcgccgataccaacaagaacccaacggtgcagcttgaggcgc 196
Query: 122 ttc 124
|||
Sbjct: 197 ttc 199
>gnl|LJGI|TC65888 similar to UniRef100_A7QF57 Cluster: Chromosome undetermined
scaffold_87, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_87, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (49%)
Length = 733
Score = 89.7 bits (45), Expect = 4e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 56 cgaagatcatgcggcttctcttcatcgccgatgccaacaagaaccccacggtgcagcttg 115
||||||||||||| | |||||||||||| ||| ||||||||||||| | |||||||||||
Sbjct: 210 cgaagatcatgcgacatctcttcatcgctgataccaacaagaacccgatggtgcagcttg 269
Query: 116 aggcgcttc 124
|||||||||
Sbjct: 270 aggcgcttc 278
>gnl|LJGI|TC61515
Length = 995
Score = 52.0 bits (26), Expect = 8e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 63 catgcggcttctcttcatcgccgatgccaacaagaaccccacggtg 108
||||| ||||||||||||||||||| | || |||||||| ||||||
Sbjct: 79 catgctgcttctcttcatcgccgatacaaataagaacccgacggtg 124