Miyakogusa Predicted Gene

Lj0g3v0098299.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0098299.1 Non Chatacterized Hit- tr|I1KIH6|I1KIH6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.22,0,PP2,Phloem
protein 2-like; FAMILY NOT NAMED,NULL,CUFF.5494.1
         (786 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77954 similar to UniRef100_A7QKF8 Cluster: Chromosome...   462   e-129
gnl|LJGI|AV412285 similar to UniRef100_A7PPN1 Cluster: Chromosom...   198   4e-50
gnl|LJGI|TC80293 similar to UniRef100_A7QKF8 Cluster: Chromosome...    72   6e-12
gnl|LJGI|TC60027 weakly similar to UniRef100_A7PXZ7 Cluster: Chr...    70   2e-11

>gnl|LJGI|TC77954 similar to UniRef100_A7QKF8 Cluster: Chromosome chr2 scaffold_112,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_112, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (24%)
          Length = 522

 Score =  462 bits (233), Expect = e-129
 Identities = 233/233 (100%)
 Strand = Plus / Plus

                                                                       
Query: 554 ctgtcaaatttcagcttacgacttctgatggccaacatgctgaatcccatagtcatttgg 613
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctgtcaaatttcagcttacgacttctgatggccaacatgctgaatcccatagtcatttgg 60

                                                                       
Query: 614 ataatccagggcactgggtcctctaccatgcaggaaactttgtttctaagaattcaaatg 673
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ataatccagggcactgggtcctctaccatgcaggaaactttgtttctaagaattcaaatg 120

                                                                       
Query: 674 atttgatgaatatcaaattttcattatctcaaatcgattgcactcatacgaaaggtggtt 733
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atttgatgaatatcaaattttcattatctcaaatcgattgcactcatacgaaaggtggtt 180

                                                                
Query: 734 tgtgtgtagactctgtacttatatgcaacagtaatgcaagaaaagagctgtaa 786
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtgtgtagactctgtacttatatgcaacagtaatgcaagaaaagagctgtaa 233


>gnl|LJGI|AV412285 similar to UniRef100_A7PPN1 Cluster: Chromosome chr8 scaffold_23,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_23, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 373

 Score =  198 bits (100), Expect = 4e-50
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtgctaatttttcctcttatgatggggattctgctgctttgggaccatggcttggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atgggtgctaatttttcctcttatgatggggattctgctgctttgggaccatggcttggg 333

                                                   
Query: 61  gatatacctgagggttgtgtggcattggcgtttcgtgatg 100
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gatatacctgagggttgtgtggcattggcgtttcgtgatg 373


>gnl|LJGI|TC80293 similar to UniRef100_A7QKF8 Cluster: Chromosome chr2 scaffold_112,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_112, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (93%)
          Length = 1280

 Score = 71.9 bits (36), Expect = 6e-12
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                       
Query: 385 gttgcatatcttcaacaaatttggtggcttgaagtggaaggagatattgatttccaattt 444
           |||||||| || || ||||| |||||| |||||||||| |||||  |||| |||| ||||
Sbjct: 588 gttgcatacctccagcaaatctggtggtttgaagtggatggagaagttgagttcccattt 647

                                           
Query: 445 ccacatggaacatacagtgtgttcttcagact 476
           |||| ||| ||||||||  |||||||||||||
Sbjct: 648 ccacctgggacatacagcttgttcttcagact 679


>gnl|LJGI|TC60027 weakly similar to UniRef100_A7PXZ7 Cluster: Chromosome chr15
           scaffold_37, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (79%)
          Length = 1247

 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 89/107 (83%)
 Strand = Plus / Plus

                                                                       
Query: 313 ttgaggattacagggatagatgatcggagatattggaatcacattgcgactaaagagtca 372
           |||| ||| ||||| ||||||||| | ||||| |||||| | ||| ||||| | || |||
Sbjct: 509 ttgaagataacaggaatagatgatagaagatactggaattatattccgactgaggaatca 568

                                                          
Query: 373 aggttccatacagttgcatatcttcaacaaatttggtggcttgaagt 419
           |||||| | |  |||||||||||||||||||| |||||| |||||||
Sbjct: 569 aggttcaagagtgttgcatatcttcaacaaatgtggtgggttgaagt 615