Miyakogusa Predicted Gene
- Lj0g3v0097549.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0097549.1 CUFF.5449.1
(1578 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO041127 similar to UniRef100_A7NZE4 Cluster: Chromosom... 1229 0.0
gnl|LJGI|GO034805 weakly similar to UniRef100_A7NZE4 Cluster: Ch... 1059 0.0
gnl|LJGI|BP036259 similar to UniRef100_A7NZE4 Cluster: Chromosom... 743 0.0
gnl|LJGI|FS360532 similar to UniRef100_A7NZE4 Cluster: Chromosom... 595 e-169
>gnl|LJGI|GO041127 similar to UniRef100_A7NZE4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (35%)
Length = 830
Score = 1229 bits (620), Expect = 0.0
Identities = 639/646 (98%), Gaps = 1/646 (0%)
Strand = Plus / Minus
Query: 931 ttggaggatactgatatcaatcaannnnnnnctgttgatggatgtcaacaccggtattgc 990
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 830 ttggaggatactgatatcaatcaatttttt-ctgttgatggatgtcaacaccggtattgc 772
Query: 991 ttttcttgtgtgaaacaacatgtggaggtgaagctgctccagggaatggtgccaaaatgc 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ttttcttgtgtgaaacaacatgtggaggtgaagctgctccagggaatggtgccaaaatgc 712
Query: 1051 cctcatgaggggtgcaaaaatgagcttctagctgaaagctgccggaaattcttgcctcat 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 cctcatgaggggtgcaaaaatgagcttctagctgaaagctgccggaaattcttgcctcat 652
Query: 1111 aaactgattgagaccatgcagcaacgaaaagtagaagcttcaattcccgttactgagaaa 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aaactgattgagaccatgcagcaacgaaaagtagaagcttcaattcccgttactgagaaa 592
Query: 1171 atctactgtccttatccaagatgctctgcattaatgtcaaaaactgaggttttagagtac 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 atctactgtccttatccaagatgctctgcattaatgtcaaaaactgaggttttagagtac 532
Query: 1231 tccaaaaatgttattggtgctcaaaagcaatgtataaaatgtcgtggttttttctgtttc 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tccaaaaatgttattggtgctcaaaagcaatgtataaaatgtcgtggttttttctgtttc 472
Query: 1291 atctgcaaggtcccttggcataatggtatgacatgtcatgcttataaaaagttgaatcct 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atctgcaaggtcccttggcataatggtatgacatgtcatgcttataaaaagttgaatcct 412
Query: 1351 aaccctcctgctgaagacctgaagctgaagtctctggcaacaaggagtctttggcggcag 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aaccctcctgctgaagacctgaagctgaagtctctggcaacaaggagtctttggcggcag 352
Query: 1411 tgtgtgaagtgtaaccatatgattgaacttgctgaaggttgctatcacatgacttgcaga 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgtgtgaagtgtaaccatatgattgaacttgctgaaggttgctatcacatgacttgcaga 292
Query: 1471 tgcggttatgaattttgctatcagtgcggagctgggtggaaggacaaaaaagcaacatgt 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tgcggttatgaattttgctatcagtgcggagctgggtggaaggacaaaaaagcaacatgt 232
Query: 1531 tcttgtccactttgggccgaggaatatttggttagagggacatgaa 1576
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tcttgtccactttgggccgaggaatatttggttagagggacatgaa 186
>gnl|LJGI|GO034805 weakly similar to UniRef100_A7NZE4 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 675
Score = 1059 bits (534), Expect = 0.0
Identities = 544/546 (99%), Gaps = 1/546 (0%)
Strand = Plus / Plus
Query: 307 gaagacctcgtccgtcggattcacgaccagaagatggcctcggagattctcgcgatccct 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gaagacctcgtccgtcggattcacgaccagaagatggcctcggagattctcgcgatccct 190
Query: 367 gagagagattgggaggagtggggtgacaattacgagaaggcgttcggcgagggttgctcc 426
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 191 gagagagat-gggaggagtggggtgacaattacgagaaggcgttcggcgggggttgctcc 249
Query: 427 tccggggaccctggtgcggtgtttagggtttatttcaagggtttggtgagtgaggatttt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tccggggaccctggtgcggtgtttagggtttatttcaagggtttggtgagtgaggatttt 309
Query: 487 gtgaatggtgagagtgagagagtggttttgggtgggattggtattgcgatttgtgatgag 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gtgaatggtgagagtgagagagtggttttgggtgggattggtattgcgatttgtgatgag 369
Query: 547 gctgataatgtgttgctggaagtttctaagccccttcttggtactgaaaccagtaagaaa 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gctgataatgtgttgctggaagtttctaagccccttcttggtactgaaaccagtaagaaa 429
Query: 607 atttcagaggctaaggctctgattgaagctttcaatgctgccattttcatggacctgaag 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atttcagaggctaaggctctgattgaagctttcaatgctgccattttcatggacctgaag 489
Query: 667 cgtgttgtttactattgtgattacccccctctcttgcaacatttaagtggaaagtggcct 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cgtgttgtttactattgtgattacccccctctcttgcaacatttaagtggaaagtggcct 549
Query: 727 gtgaatcagcagaagcttgctagactagttaatgaagtgtatcttcttcaaagaaaattt 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gtgaatcagcagaagcttgctagactagttaatgaagtgtatcttcttcaaagaaaattt 609
Query: 787 acatactgcaatccaaggcttgtggcgagacatgatctcaagtatgcatttaagctggca 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 acatactgcaatccaaggcttgtggcgagacatgatctcaagtatgcatttaagctggca 669
Query: 847 agagat 852
||||||
Sbjct: 670 agagat 675
Score = 250 bits (126), Expect = 2e-65
Identities = 129/130 (99%)
Strand = Plus / Plus
Query: 1 atggacgacatggacgaaacccaagacttgcagcggttactatcggagcaccgccgtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 atggacgacatggacgaaacccaagacttgcagcggttactatcggagcaccgccgtgaa 70
Query: 61 ctcaccgccgcggaagccatggaaaccgatctcgactttgcataccgtatccagttacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ctcaccgccgcggaagccatggaaaccgatctcgactttgcataccgtatccagttacaa 130
Query: 121 gaagccctcg 130
|||| |||||
Sbjct: 131 gaagacctcg 140
>gnl|LJGI|BP036259 similar to UniRef100_A7NZE4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (19%)
Length = 517
Score = 743 bits (375), Expect = 0.0
Identities = 378/379 (99%)
Strand = Plus / Minus
Query: 1197 tgcattaatgtcaaaaactgaggttttagagtactccaaaaatgttattggtgctcaaaa 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tgcattaatgtcaaaaactgaggttttagagtactccaaaaatgttattggtgctcaaaa 458
Query: 1257 gcaatgtataaaatgtcgtggttttttctgtttcatctgcaaggtcccttggcataatgg 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gcaatgtataaaatgtcgtggttttttctgtttcatctgcaaggtcccttggcataatgg 398
Query: 1317 tatgacatgtcatgcttataaaaagttgaatcctaaccctcctgctgaagacctgaagct 1376
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 397 tatgacatgtcatgcttataaaaagttgaatcctaaccctccagctgaagacctgaagct 338
Query: 1377 gaagtctctggcaacaaggagtctttggcggcagtgtgtgaagtgtaaccatatgattga 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gaagtctctggcaacaaggagtctttggcggcagtgtgtgaagtgtaaccatatgattga 278
Query: 1437 acttgctgaaggttgctatcacatgacttgcagatgcggttatgaattttgctatcagtg 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 acttgctgaaggttgctatcacatgacttgcagatgcggttatgaattttgctatcagtg 218
Query: 1497 cggagctgggtggaaggacaaaaaagcaacatgttcttgtccactttgggccgaggaata 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 cggagctgggtggaaggacaaaaaagcaacatgttcttgtccactttgggccgaggaata 158
Query: 1557 tttggttagagggacatga 1575
|||||||||||||||||||
Sbjct: 157 tttggttagagggacatga 139
>gnl|LJGI|FS360532 similar to UniRef100_A7NZE4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 691
Score = 595 bits (300), Expect = e-169
Identities = 452/504 (89%), Gaps = 9/504 (1%)
Strand = Plus / Minus
Query: 1056 tgaggggtgcaaaaatgagcttctagctgaaagctgccggaaattcttgcctcataaact 1115
||||||||| || ||||| ||||||||||| || |||||||| |||||||||||||||||
Sbjct: 691 tgaggggtgtaataatgaacttctagctgacagttgccggaatttcttgcctcataaact 632
Query: 1116 gattgagaccatgcagcaacgaaaagtagaagcttcaattcccgttactgagaaaatcta 1175
|||||||||||||||||||||||| | |||||||||||||||||||| || ||||| ||
Sbjct: 631 aattgagaccatgcagcaacgaaaattggaagcttcaattcccgttaccgataaaattta 572
Query: 1176 ctgtccttatccaagatgctctgcattaatgtcaaaaactgaggttttagagtactccaa 1235
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttgtccttatcctagatgctctgcattaatgtcaaaaactgaggttttagagtactccaa 512
Query: 1236 aaatgttattggtgctcaa---------aagcaatgtataaaatgtcgtggttttttctg 1286
|||| ||| |||| || || ||| ||||||||||||||| ||||||||||
Sbjct: 511 aaatcttactggttctgaaccaggacgcaagagatgtataaaatgtcgccgttttttctg 452
Query: 1287 tttcatctgcaaggtcccttggcataatggtatgacatgtcatgcttataaaaagttgaa 1346
|||||| |||||||||||||||||| || |||| ||||| || || |||| ||||||
Sbjct: 451 tttcatgtgcaaggtcccttggcattttgatatgtcatgttataggtacaaaatgttgaa 392
Query: 1347 tcctaaccctcctgctgaagacctgaagctgaagtctctggcaacaaggagtctttggcg 1406
|||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 391 tcctaaccctccagctgaagacctgaagctgaagtctctggcaacaagtagtttttggcg 332
Query: 1407 gcagtgtgtgaagtgtaaccatatgattgaacttgctgaaggttgctatcacatgacttg 1466
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 331 gcagtgtgtgaaatgtaaccatatgattgaacttgctgaaggttgctatcacataacttg 272
Query: 1467 cagatgcggttatgaattttgctatcagtgcggagctgggtggaaggacaaaaaagcaac 1526
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 271 cagatgcggtaatgaattttgctatcagtgtggagctgagtggaaggacaaaaaagcaac 212
Query: 1527 atgttcttgtccactttgggccga 1550
|||| ||||||||||||||||||
Sbjct: 211 atgtgattgtccactttgggccga 188