Miyakogusa Predicted Gene

Lj0g3v0097449.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0097449.1 tr|A9TYR9|A9TYR9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=YDG1501 PE=4
SV=1,45.61,1e-18,coiled-coil,NULL; seg,NULL,CUFF.5438.1
         (354 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61044 similar to UniRef100_A7P803 Cluster: Chromosome...   678   0.0  
gnl|LJGI|TC68715 similar to UniRef100_A7P803 Cluster: Chromosome...   283   4e-76
gnl|LJGI|TC69959 similar to UniRef100_A7QDZ6 Cluster: Chromosome...    54   6e-07

>gnl|LJGI|TC61044 similar to UniRef100_A7P803 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (79%)
          Length = 972

 Score =  678 bits (342), Expect = 0.0
 Identities = 351/354 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaccactaagaagcctgttgttgtggaactttatgatgagatagtcttccctgatcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atgaccactaagaagcctgttgttgtggaactttatgatgagatagtcttccctgatcct 403

                                                                       
Query: 61  tctgaggctttcttatcccgtgtgcaaggtcatccagctgtgaacttgccaagattacct 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 404 tctgaggctttcttatcccgtgtgcagggtcatccagctgtgaacttgccaagattacct 463

                                                                       
Query: 121 gctggggtcaccttgcctcctcccatacctgttgaggatgcaagtaaaagaaggaaaggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gctggggtcaccttgcctcctcccatacctgttgaggatgcaagtaaaagaaggaaaggt 523

                                                                       
Query: 181 gataccaaagatcattccttaacccaatggttcacgaatttctcagaagcagatgagctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gataccaaagatcattccttaacccaatggttcacgaatttctcagaagcagatgagctc 583

                                                                       
Query: 241 ttgcagcttgctgcagctcgccagcaggttcaagctcacattgctaaactcagacgacag 300
           ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 584 ttgcagcttgctgcagctcgccaacgggttcaagctcacattgctaaactcagacgacag 643

                                                                 
Query: 301 ataagcttgatagatggacagcaacagcagtttaaatctactcctgagcagtag 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ataagcttgatagatggacagcaacagcagtttaaatctactcctgagcagtag 697


>gnl|LJGI|TC68715 similar to UniRef100_A7P803 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (63%)
          Length = 658

 Score =  283 bits (143), Expect = 4e-76
 Identities = 143/143 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaccactaagaagcctgttgttgtggaactttatgatgagatagtcttccctgatcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 atgaccactaagaagcctgttgttgtggaactttatgatgagatagtcttccctgatcct 575

                                                                       
Query: 61  tctgaggctttcttatcccgtgtgcaaggtcatccagctgtgaacttgccaagattacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tctgaggctttcttatcccgtgtgcaaggtcatccagctgtgaacttgccaagattacct 635

                                  
Query: 121 gctggggtcaccttgcctcctcc 143
           |||||||||||||||||||||||
Sbjct: 636 gctggggtcaccttgcctcctcc 658


>gnl|LJGI|TC69959 similar to UniRef100_A7QDZ6 Cluster: Chromosome chr4 scaffold_83,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_83, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (84%)
          Length = 1033

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 87/107 (81%)
 Strand = Plus / Plus

                                                                       
Query: 177 aggtgataccaaagatcattccttaacccaatggttcacgaatttctcagaagcagatga 236
           ||||||||||||||||||| |  ||| ||| ||||||  ||| ||||||||  | |||||
Sbjct: 743 aggtgataccaaagatcatcctctaagccagtggttcttgaacttctcagagactgatga 802

                                                          
Query: 237 gctcttgcagcttgctgcagctcgccagcaggttcaagctcacattg 283
           |||||   | | ||| |||||| | |||||||| |||||||||||||
Sbjct: 803 gctctcaaaacctgcagcagctagacagcaggtgcaagctcacattg 849