Miyakogusa Predicted Gene

Lj0g3v0097159.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0097159.1 gene.g7414.t1.1
         (237 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67141 similar to UniRef100_O82232 Cluster: UPF0057 me...   470   e-132

>gnl|LJGI|TC67141 similar to UniRef100_O82232 Cluster: UPF0057 membrane protein
           At2g24040; n=1; Arabidopsis thaliana|Rep: UPF0057
           membrane protein At2g24040 - Arabidopsis thaliana
           (Mouse-ear cress), partial (96%)
          Length = 641

 Score =  470 bits (237), Expect = e-132
 Identities = 237/237 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgccgtcccgctgcgcaatttgctgcgagttgctgatcgccgtcttgctccctccactc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atgccgtcccgctgcgcaatttgctgcgagttgctgatcgccgtcttgctccctccactc 177

                                                                       
Query: 61  ggagtttgcttgcgccatggttgctgcactgttgaattcatcatctgcttgctacttact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ggagtttgcttgcgccatggttgctgcactgttgaattcatcatctgcttgctacttact 237

                                                                       
Query: 121 attctgggctatatccctggtataatttatgccctctatgcgattatctttattgatcgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 attctgggctatatccctggtataatttatgccctctatgcgattatctttattgatcgt 297

                                                                    
Query: 181 gatcagtactttgatgaatctaggcgtcctctgtatgcaccaggacaacagtactga 237
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gatcagtactttgatgaatctaggcgtcctctgtatgcaccaggacaacagtactga 354