Miyakogusa Predicted Gene
- Lj0g3v0096979.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0096979.2 Non Chatacterized Hit- tr|I1JYY1|I1JYY1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51068
PE,83.3,0,LIM_bind,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL,CUFF.5418.2
(2724 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65917 similar to UniRef100_A7NSL6 Cluster: Chromosome... 630 e-179
gnl|LJGI|TC63334 similar to UniRef100_A7NSL6 Cluster: Chromosome... 472 e-132
gnl|LJGI|TC70531 similar to UniRef100_A7NSL6 Cluster: Chromosome... 351 1e-95
gnl|LJGI|TC67204 similar to UniRef100_A7NSL6 Cluster: Chromosome... 165 2e-39
gnl|LJGI|TC60459 similar to UniRef100_A7NSL6 Cluster: Chromosome... 109 9e-23
>gnl|LJGI|TC65917 similar to UniRef100_A7NSL6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 744
Score = 630 bits (318), Expect = e-179
Identities = 318/318 (100%)
Strand = Plus / Plus
Query: 1 atggtggctccgggtccagggccacccacacccattggtggtggccagtccgtttcgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atggtggctccgggtccagggccacccacacccattggtggtggccagtccgtttcgcct 486
Query: 61 tctcttttgagatcaaattctggaatgctaggagctcaaggaggtcccatgccttcacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tctcttttgagatcaaattctggaatgctaggagctcaaggaggtcccatgccttcacag 546
Query: 121 tcttctttcccttcgcttgtgtcgccgcgtacgcagttcaatggcatgaacattttagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tcttctttcccttcgcttgtgtcgccgcgtacgcagttcaatggcatgaacattttagga 606
Query: 181 aatatgacaaatgtaacttctatgctgaatcaatctttcccaaatggagttcaaaatccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aatatgacaaatgtaacttctatgctgaatcaatctttcccaaatggagttcaaaatccg 666
Query: 241 gcactctctggtccaggtagtagccagcttggagggattgatactggagctgaaacagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gcactctctggtccaggtagtagccagcttggagggattgatactggagctgaaacagac 726
Query: 301 ccactctctagtgtgggc 318
||||||||||||||||||
Sbjct: 727 ccactctctagtgtgggc 744
>gnl|LJGI|TC63334 similar to UniRef100_A7NSL6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 985
Score = 472 bits (238), Expect = e-132
Identities = 241/242 (99%)
Strand = Plus / Plus
Query: 2483 acagtaataattcgggtgtcggggttggtggttatggaacaatgggtcttggtcaatcct 2542
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 acagtaataattcgggtgtcggggttggtggttatggaaccatgggtcttggtcaatcct 60
Query: 2543 ctatgcctaatggaatgagagctgcaatgttaaataattcagtcatgaatggaagaggag 2602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctatgcctaatggaatgagagctgcaatgttaaataattcagtcatgaatggaagaggag 120
Query: 2603 gaatgtcatctagggatcaagctatgaatcaccaacaagatatgtcaaaccaactactta 2662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaatgtcatctagggatcaagctatgaatcaccaacaagatatgtcaaaccaactactta 180
Query: 2663 gtgggctaggagcagtaaatgggtttagtaatcttcaatttgattggaaaccttctcctt 2722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgggctaggagcagtaaatgggtttagtaatcttcaatttgattggaaaccttctcctt 240
Query: 2723 ga 2724
||
Sbjct: 241 ga 242
>gnl|LJGI|TC70531 similar to UniRef100_A7NSL6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 589
Score = 351 bits (177), Expect = 1e-95
Identities = 177/177 (100%)
Strand = Plus / Plus
Query: 1 atggtggctccgggtccagggccacccacacccattggtggtggccagtccgtttcgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atggtggctccgggtccagggccacccacacccattggtggtggccagtccgtttcgcct 472
Query: 61 tctcttttgagatcaaattctggaatgctaggagctcaaggaggtcccatgccttcacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tctcttttgagatcaaattctggaatgctaggagctcaaggaggtcccatgccttcacag 532
Query: 121 tcttctttcccttcgcttgtgtcgccgcgtacgcagttcaatggcatgaacatttta 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tcttctttcccttcgcttgtgtcgccgcgtacgcagttcaatggcatgaacatttta 589
>gnl|LJGI|TC67204 similar to UniRef100_A7NSL6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 711
Score = 165 bits (83), Expect = 2e-39
Identities = 193/230 (83%), Gaps = 6/230 (2%)
Strand = Plus / Plus
Query: 2497 ggtgtcggggttggtggttatggaacaatgggtcttggtcaatcctctatgcctaatgga 2556
||||| || |||||||||||||| |||||||||||||||| ||| |||| | ||||||
Sbjct: 188 ggtgttggagttggtggttatggcacaatgggtcttggtccatctggtatggccaatgga 247
Query: 2557 atgagagctgcaatgttaaataattcagtcatgaatggaagaggaggaatgtcatcta-- 2614
||||| |||||| ||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 248 gtgagacaagcaatgggcaataattcagttatgaatggaaggataggaatggcatctatt 307
Query: 2615 ----gggatcaagctatgaatcaccaacaagatatgtcaaaccaactacttagtgggcta 2670
|||| |||||||| ||||| || || ||| |||||| |||||||||||||||||||
Sbjct: 308 gccagggaccaagctataaatcatcatcaggatttgtcaagccaactacttagtgggcta 367
Query: 2671 ggagcagtaaatgggtttagtaatcttcaatttgattggaaaccttctcc 2720
|||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 368 ggagcagttaatggttttagtaatcttcaatttgattggaaaccatctcc 417
Score = 95.6 bits (48), Expect = 1e-18
Identities = 102/120 (85%)
Strand = Plus / Plus
Query: 2310 cgatgcgcagagctccgtccagaaaatcatacatgagatgatgatgtcatcccagataaa 2369
|||||| |||||||| ||||| || ||||| ||||||||||||||||| |||||||| ||
Sbjct: 7 cgatgctcagagctcagtccaaaagatcattcatgagatgatgatgtcctcccagatgaa 66
Query: 2370 tggcagcggtggaatgggaggtgttggttctcttggaaatgacatgaagaatataaatgg 2429
|| || | ||||||| |||| || |||||||||||||||||||||||| |||||||
Sbjct: 67 tgtcacagcaggaatggcaggtaggggctctcttggaaatgacatgaagaatgtaaatgg 126
>gnl|LJGI|TC60459 similar to UniRef100_A7NSL6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 934
Score = 109 bits (55), Expect = 9e-23
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 528 gcagcagcattatcaatcaattcgaggaggaataggtggtattggacctgtaaagttgga 587
||||||||||| ||||||| |||||||||| || |||||||||||||| || ||||||||
Sbjct: 823 gcagcagcattttcaatcagttcgaggagggatgggtggtattggaccggtgaagttgga 882
Query: 588 gccccaggtaaacaacgatcaacttggtcagcagcagca 626
||||||||||||||| ||| | |||| |||||||||||
Sbjct: 883 gccccaggtaaacaatgataagtttgggcagcagcagca 921