Miyakogusa Predicted Gene

Lj0g3v0096739.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0096739.1 Non Chatacterized Hit- tr|C6T5K8|C6T5K8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19055
PE,82.35,0.000000006, ,CUFF.5371.1
         (103 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74923 similar to UniRef100_Q4RZA0 Cluster: Chromosome...   204   7e-53
gnl|LJGI|TC62234 weakly similar to UniRef100_A7Q4Z7 Cluster: Chr...    86   4e-17

>gnl|LJGI|TC74923 similar to UniRef100_Q4RZA0 Cluster: Chromosome 1 SCAF14944, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome 1 SCAF14944, whole genome
           shotgun sequence - Tetraodon nigroviridis (Green
           puffer), partial (16%)
          Length = 618

 Score =  204 bits (103), Expect = 7e-53
 Identities = 103/103 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtataatcaggagttgcttctctctcatagcagggacagtcttcggggtttacttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 atgggtataatcaggagttgcttctctctcatagcagggacagtcttcggggtttacttg 265

                                                      
Query: 61  gctcagaattaccaggttcctaacctcaagaagctagctgata 103
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gctcagaattaccaggttcctaacctcaagaagctagctgata 308


>gnl|LJGI|TC62234 weakly similar to UniRef100_A7Q4Z7 Cluster: Chromosome undetermined
           scaffold_51, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_51, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (98%)
          Length = 779

 Score = 85.7 bits (43), Expect = 4e-17
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtataatcaggagttgcttctctctcatagcagggacagtcttcggggtttacttg 60
           ||||||||||||| ||||||||||||| ||||| ||||||||||||  || |||||||||
Sbjct: 159 atgggtataatcaagagttgcttctctttcataacagggacagtctgtggtgtttacttg 218

                      
Query: 61  gctcagaatta 71
           || ||||||||
Sbjct: 219 gcccagaatta 229