Miyakogusa Predicted Gene
- Lj0g3v0096699.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0096699.1 Non Chatacterized Hit- tr|I1L9V5|I1L9V5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55832 PE,81.69,0,no
description,Helix-loop-helix domain; helix loop helix
domain,Helix-loop-helix domain; HLH,Helix-l,CUFF.5385.1
(645 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV772495 homologue to UniRef100_A2Q3E9 Cluster: Helix-l... 446 e-125
gnl|LJGI|TC62805 similar to UniRef100_A2Q3E9 Cluster: Helix-loop... 208 3e-53
gnl|LJGI|BP042173 similar to UniRef100_A2Q3E9 Cluster: Helix-loo... 206 1e-52
gnl|LJGI|TC63838 similar to UniRef100_A2Q3E9 Cluster: Helix-loop... 165 4e-40
gnl|LJGI|TC66245 similar to UniRef100_Q8GZ13 Cluster: Protein BE... 64 1e-09
gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BE... 62 5e-09
gnl|LJGI|TC68705 similar to UniRef100_A2Q3E9 Cluster: Helix-loop... 60 2e-08
>gnl|LJGI|AV772495 homologue to UniRef100_A2Q3E9 Cluster: Helix-loop-helix
DNA-binding; n=1; Medicago truncatula|Rep:
Helix-loop-helix DNA-binding - Medicago truncatula
(Barrel medic), partial (19%)
Length = 572
Score = 446 bits (225), Expect = e-125
Identities = 231/233 (99%)
Strand = Plus / Minus
Query: 26 aggagcgagagaagaaggttaaagtgtcgtcgaagaagagcaaaagcgccatcgccgccg 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aggagcgagagaagaaggttaaagtgtcgtcgaagaagagcaaaagcgccatcgccgccg 513
Query: 86 acgatagatgcggcggcgatggcgacggcgacggcgagaagcttccgtacgtgcacgttc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 acgatagatacggcggcgatggcgacggcgacggcgagaagcttccgtacgtgcacgttc 453
Query: 146 gcgttcgtcgaggtcaagctactgatagtcatagcttagcagaaagggctaggagagaga 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gcgttcgtcgaggtcaagctactgatagtcatagcttagcagaaagggctaggagagaga 393
Query: 206 agataaatgctcggatgaaacttttacaagagctagtccctggttgcaacaag 258
||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 392 agataaatgctcggatgaaacttttacaagagctagtccctggttgctacaag 340
>gnl|LJGI|TC62805 similar to UniRef100_A2Q3E9 Cluster: Helix-loop-helix DNA-binding;
n=1; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic),
partial (61%)
Length = 831
Score = 208 bits (105), Expect = 3e-53
Identities = 192/221 (86%)
Strand = Plus / Plus
Query: 115 gacggcgagaagcttccgtacgtgcacgttcgcgttcgtcgaggtcaagctactgatagt 174
|||||||||||||||||||| || || ||||||||||| ||||||||||| || ||| ||
Sbjct: 608 gacggcgagaagcttccgtatgtccatgttcgcgttcggcgaggtcaagccacagattgt 667
Query: 175 catagcttagcagaaagggctaggagagagaagataaatgctcggatgaaacttttacaa 234
|| || || |||||||| ||||||||||||||||| ||||| || ||||| |||||||||
Sbjct: 668 cacagtttggcagaaagagctaggagagagaagatcaatgcgcgcatgaagcttttacaa 727
Query: 235 gagctagtccctggttgcaacaagatatcaggaacagcattggttctagataatatcatc 294
|| || |||||||||||| |||||||||| ||||| ||||||||||| ||| | |||||
Sbjct: 728 gaactggtccctggttgcgacaagatatctggaacggcattggttctggatgaaatcatt 787
Query: 295 aaccatgtgcaatctctgcagcatgaagtggagattttatc 335
||||||||||||||| |||| | | |||||||||| |||||
Sbjct: 788 aaccatgtgcaatctttgcaacgtcaagtggagatcttatc 828
>gnl|LJGI|BP042173 similar to UniRef100_A2Q3E9 Cluster: Helix-loop-helix DNA-binding;
n=1; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic),
partial (9%)
Length = 489
Score = 206 bits (104), Expect = 1e-52
Identities = 104/104 (100%)
Strand = Plus / Minus
Query: 542 aatacaaccctaattttatgactcctgaaaactcgcttttgagttatgactcatcagtaa 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aatacaaccctaattttatgactcctgaaaactcgcttttgagttatgactcatcagtaa 430
Query: 602 attcagtatctctgcactcaaatcagttaaagatggagctctga 645
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 attcagtatctctgcactcaaatcagttaaagatggagctctga 386
>gnl|LJGI|TC63838 similar to UniRef100_A2Q3E9 Cluster: Helix-loop-helix DNA-binding;
n=1; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic),
partial (29%)
Length = 713
Score = 165 bits (83), Expect = 4e-40
Identities = 146/167 (87%)
Strand = Plus / Plus
Query: 475 aacagacaacattatcagcaatcatggcaattcgatgcattccaccaaccgctttggggt 534
||||||| |||||||| ||| ||||||||||||||||||||||||||| |||||||
Sbjct: 129 aacagaccgcattatcaacaacaatggcaattcgatgcattccaccaaccactttgggcg 188
Query: 535 agggaagaatacaaccctaattttatgactcctgaaaactcgcttttgagttatgactca 594
||||| ||| |||||| |||||| |||||||| |||| ||| |||||||||||||||||
Sbjct: 189 agggaggaagacaaccataatttcatgactccggaaacctcacttttgagttatgactcg 248
Query: 595 tcagtaaattcagtatctctgcactcaaatcagttaaagatggagct 641
|||| |||||||| ||||||||||||||| || || |||||||||||
Sbjct: 249 tcagcaaattcagcatctctgcactcaaaccaattgaagatggagct 295
>gnl|LJGI|TC66245 similar to UniRef100_Q8GZ13 Cluster: Protein BEE 1; n=1;
Arabidopsis thaliana|Rep: Protein BEE 1 - Arabidopsis
thaliana (Mouse-ear cress), partial (39%)
Length = 998
Score = 63.9 bits (32), Expect = 1e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 155 gaggtcaagctactgatagtcatagcttagcagaaagggctaggagag 202
|||||||||||||||||||||| || ||||||||||||| ||| ||||
Sbjct: 517 gaggtcaagctactgatagtcacagtttagcagaaagggttagaagag 564
>gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BEE 3; n=1;
Arabidopsis thaliana|Rep: Protein BEE 3 - Arabidopsis
thaliana (Mouse-ear cress), partial (41%)
Length = 1161
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 155 gaggtcaagctactgatagtcatagcttagcagaaaggg 193
|||||||||||||||||||||| || |||||||||||||
Sbjct: 522 gaggtcaagctactgatagtcacagtttagcagaaaggg 560
>gnl|LJGI|TC68705 similar to UniRef100_A2Q3E9 Cluster: Helix-loop-helix DNA-binding;
n=1; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic),
partial (46%)
Length = 734
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 115 gacggcgagaagcttccgtacgtgcacgttcgcgttcgtcgaggtc 160
|||||||||||||||||||| || || ||||||||||| |||||||
Sbjct: 664 gacggcgagaagcttccgtatgtccatgttcgcgttcggcgaggtc 709
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 caagaggaaggagcgagagaagaagg 43
||||||||||||||||||||||||||
Sbjct: 582 caagaggaaggagcgagagaagaagg 607