Miyakogusa Predicted Gene
- Lj0g3v0095249.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0095249.1 tr|B9IQ79|B9IQ79_POPTR Tir-nbs-lrr resistance
protein OS=Populus trichocarpa GN=POPTRDRAFT_574144
PE,27.25,5e-17,coiled-coil,NULL; ATPases associated with a variety of
cellula,AAA+ ATPase domain; NB-ARC,NB-ARC; LR,CUFF.5294.1
(2748 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO036511 similar to UniRef100_Q1LDE5 Cluster: Uncharact... 240 4e-62
gnl|LJGI|DC593322 similar to UniRef100_A7QGH9 Cluster: Chromosom... 190 3e-47
gnl|LJGI|TC79595 101 2e-20
gnl|LJGI|AV425697 similar to UniRef100_A5IMF2 Cluster: FAD-depen... 92 2e-17
gnl|LJGI|FS361968 UniRef100_A7QHA3 Cluster: Chromosome chr18 sca... 58 3e-07
gnl|LJGI|FS359303 similar to UniRef100_A8ZTA6 Cluster: Ribonucle... 56 1e-06
>gnl|LJGI|GO036511 similar to UniRef100_Q1LDE5 Cluster: Uncharacterized protein UPF0065
precursor; n=1; Ralstonia metallidurans CH34|Rep:
Uncharacterized protein UPF0065 precursor - Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839),
partial (5%)
Length = 434
Score = 240 bits (121), Expect = 4e-62
Identities = 275/325 (84%), Gaps = 6/325 (1%)
Strand = Plus / Plus
Query: 1885 cctgagcttccgttgttgatcaaggaacttaacgccgacggatgtgactcattagagaca 1944
||||||||||||||||| |||||||| |||||| ||||||| ||| || ||||| ||||
Sbjct: 3 cctgagcttccgttgttaatcaaggagcttaacaccgacggctgtaccttattagtgaca 62
Query: 1945 gtatccactttaaagacattttcagtgaaaatgaaaggaatggagaaacacatatcattc 2004
|||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 63 atatcagctttaaagactttttcagtgaagatgaaaggaatgaagaaacacatatcattc 122
Query: 2005 atgaatgcaaagaaac---cgaaggaatcttcactgctccagattatggaagacgccatg 2061
||||||||||| || ||| ||||||| ||| ||||||||||||||||| | ||
Sbjct: 123 ctgaatgcaaagggactgatgaatgaatctttactcctccagattatggaagatgttgtg 182
Query: 2062 tttgcaatgaagagggctcaattgtgcaatgtatttgtaagaagtagtgttgcggtttgc 2121
|||||||||||||||||| | ||||||||| ||||||||||||| |||||| | | ||||
Sbjct: 183 tttgcaatgaagagggctgagttgtgcaatatatttgtaagaagcagtgttaccgcttgc 242
Query: 2122 ttcccaggaaggagtgtcccctcaggctcagggcaagggttgtttgcatatcgaagcaaa 2181
||| ||||||| |||||||||||| ||||| || ||| | ||||||||||| |
Sbjct: 243 ttctcaggaagcagtgtcccctcattgccaggg---tcgtcgttcgtatatcgaagcaca 299
Query: 2182 gggtcctcaattaccattgaacctc 2206
|||||||||||||||||||||||||
Sbjct: 300 gggtcctcaattaccattgaacctc 324
>gnl|LJGI|DC593322 similar to UniRef100_A7QGH9 Cluster: Chromosome undetermined
scaffold_92, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_92, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (21%)
Length = 591
Score = 190 bits (96), Expect = 3e-47
Identities = 183/212 (86%)
Strand = Plus / Plus
Query: 83 gaagaattggactttggggcatggggggaataggtaagacaaccattgctaaagccttgt 142
||||||||||| ||||||| ||||| || ||||||||||||||||||||||||||| |||
Sbjct: 260 gaagaattggaatttgggggatgggaggtataggtaagacaaccattgctaaagccatgt 319
Query: 143 ttaatgaatactcccctgtatatgacaatgtatgcttcttggaaaatgtaagagaagaat 202
|| || ||| |||| |||||||| ||| |||||||||||||| ||||||||||| |
Sbjct: 320 ttgccaaacacttccctcaatatgacagtgtgtgcttcttggaaaacgtaagagaagagt 379
Query: 203 cacagattcacggactaacacatatccgtgatgagcttctctctgagctactaaaggaac 262
|||||| ||||| ||| || ||||||| ||| ||||||||| ||||||||| |||||||
Sbjct: 380 cacagaagcacgggctagcatatatccgagataagcttctctttgagctactgaaggaac 439
Query: 263 aagttacagtatccaacttttctggatccaca 294
||||||||| |||||| ||||||||||||||
Sbjct: 440 aagttacagcatccaatatttctggatccaca 471
>gnl|LJGI|TC79595
Length = 1392
Score = 101 bits (51), Expect = 2e-20
Identities = 108/127 (85%)
Strand = Plus / Plus
Query: 1979 aaggaatggagaaacacatatcattcatgaatgcaaagaaaccgaaggaatcttcactgc 2038
|||||| ||||||| ||||||| || |||||||||| ||||| ||| |||| ||| || |
Sbjct: 9 aaggaaaggagaaagacatatcgtttatgaatgcaatgaaactgaatgaatgttcgctcc 68
Query: 2039 tccagattatggaagacgccatgtttgcaatgaagagggctcaattgtgcaatgtatttg 2098
|||||||||||||||||||| ||||| ||||| |||| ||| | ||| |||| ||||||
Sbjct: 69 tccagattatggaagacgccctgtttacaatggagagtgctgatttgaacaatctatttg 128
Query: 2099 taagaag 2105
|||||||
Sbjct: 129 taagaag 135
Score = 85.7 bits (43), Expect = 1e-15
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 2125 ccaggaaggagtgtcccctcaggctcagggcaagggttgtttgcatatcgaagcaaaggg 2184
|||||||| |||||||||||||| ||||||||| ||||||| ||||||||| || ||||
Sbjct: 188 ccaggaagcagtgtcccctcaggttcagggcaaaggttgttgacatatcgaaccacaggg 247
Query: 2185 tcctcaattaccattgaac 2203
|||||||||| |||||||
Sbjct: 248 tcctcaattaatattgaac 266
>gnl|LJGI|AV425697 similar to UniRef100_A5IMF2 Cluster: FAD-dependent pyridine
nucleotide-disulphide oxidoreductase precursor; n=1;
Thermotoga, partial (3%)
Length = 330
Score = 91.7 bits (46), Expect = 2e-17
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 1945 gtatccactttaaagacattttcagtgaaaatgaaaggaatggagaaacacatatcattc 2004
||||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||||
Sbjct: 42 gtatccactttaaagactctttcagtgaagatgataggaaaggagaaacacatatcattt 101
Query: 2005 atgaatgcaa 2014
||||||||||
Sbjct: 102 atgaatgcaa 111
Score = 79.8 bits (40), Expect = 8e-14
Identities = 81/95 (85%), Gaps = 6/95 (6%)
Strand = Plus / Plus
Query: 2106 tagtgttgcggtttgcttcccaggaaggagtgtcccctcaggctca------gggcaagg 2159
|||||||||||||||||| |||||||| | ||| |||||||||||| ||||||||
Sbjct: 233 tagtgttgcggtttgcttaccaggaagcaatgttccctcaggctcaggcttggggcaagg 292
Query: 2160 gttgtttgcatatcgaagcaaagggtcctcaatta 2194
|| || ||||||||||||| ||||||||||||||
Sbjct: 293 gtctttcgcatatcgaagcacagggtcctcaatta 327
>gnl|LJGI|FS361968 UniRef100_A7QHA3 Cluster: Chromosome chr18 scaffold_96 whole genome
shotgun sequence; n=1; Vitis vinifera|Rep:, partial (1%)
Length = 248
Score = 58.0 bits (29), Expect = 3e-07
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 1059 tggcatattcgatttgcctaaattaagaattcttagatttt 1099
|||||||||| |||||||||||||||||||| |||| ||||
Sbjct: 53 tggcatattcaatttgcctaaattaagaatttttaggtttt 13
>gnl|LJGI|FS359303 similar to UniRef100_A8ZTA6 Cluster: Ribonuclease H; n=1;
Desulfococcus oleovorans Hxd3|Rep: Ribonuclease H -
Desulfococcus oleovorans Hxd3, partial (7%)
Length = 555
Score = 56.0 bits (28), Expect = 1e-06
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 2478 agagtgtgggatttacctgaattgttgctcaaattctgagctccagagtctcatagggga 2537
||||||||| |||| | ||| |||||||| ||||||||| | |||||||||| || | |
Sbjct: 456 agagtgtggaatttccttgatgtgttgctccaattctgagtttcagagtctcaaagcgta 397
Query: 2538 agcagaattggaaccagagatcaagtctgagtggccatcggcac 2581
||||| || ||| ||||||||||| |||| |||||||||||
Sbjct: 396 cacagaaacggtaccggagatcaagtcggagttgccatcggcac 353