Miyakogusa Predicted Gene
- Lj0g3v0094889.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0094889.1 Non Chatacterized Hit- tr|I1J3A1|I1J3A1_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,40.17,3e-19,TPR-like,NULL; Tetratricopeptide
repeats,Tetratricopeptide repeat; TPR_11,NULL;
TPR_1,Tetratricopept,CUFF.5269.1
(447 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72903 similar to UniRef100_A7QEJ1 Cluster: Chromosome... 886 0.0
gnl|LJGI|BP052399 similar to UniRef100_UPI000065EFA3 Cluster: CD... 280 7e-75
>gnl|LJGI|TC72903 similar to UniRef100_A7QEJ1 Cluster: Chromosome chr17 scaffold_85,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_85, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 935
Score = 886 bits (447), Expect = 0.0
Identities = 447/447 (100%)
Strand = Plus / Plus
Query: 1 atggcaagtctgtttgctggaggagataactatggccaagaccccacgaagaatagtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atggcaagtctgtttgctggaggagataactatggccaagaccccacgaagaatagtttg 386
Query: 61 gatgcccttgctttgaggaagagagcagatattgagtttgagaagcgaaatttcgttgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gatgcccttgctttgaggaagagagcagatattgagtttgagaagcgaaatttcgttgag 446
Query: 121 gctgagcttctcctctcacaggctatagatttaaagtcatttggtggcatgcatgtcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gctgagcttctcctctcacaggctatagatttaaagtcatttggtggcatgcatgtcaca 506
Query: 181 tttaaatgcaggtcattggtaaggctggaattgggaaactactctggtgccctcaatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tttaaatgcaggtcattggtaaggctggaattgggaaactactctggtgccctcaatgat 566
Query: 241 gctacagaggctctggcattagctccccggtattctgaggcttatatctgcgtaggtaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gctacagaggctctggcattagctccccggtattctgaggcttatatctgcgtaggtaat 626
Query: 301 gcctttttggcattggacaaatttgatttggcagaacagtcatatttagcagctttagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gcctttttggcattggacaaatttgatttggcagaacagtcatatttagcagctttagat 686
Query: 361 atagatccttcgatccgtcattctaaatcgttcaaggttcgaatagcaatgcttaaggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 atagatccttcgatccgtcattctaaatcgttcaaggttcgaatagcaatgcttaaggag 746
Query: 421 aaacttgctgctgctaataggacataa 447
|||||||||||||||||||||||||||
Sbjct: 747 aaacttgctgctgctaataggacataa 773
>gnl|LJGI|BP052399 similar to UniRef100_UPI000065EFA3 Cluster: CDNA FLJ90254 fis
clone NT2RM4000295.; n=1; Takifugu rubripes|Rep: CDNA
FLJ90254 fis, partial (2%)
Length = 322
Score = 280 bits (141), Expect = 7e-75
Identities = 230/253 (90%), Gaps = 5/253 (1%)
Strand = Plus / Minus
Query: 196 ttggtaaggctggaattgggaaactactctggtgccctcaatgatgctacagaggctctg 255
||||||||||||||||||||||||||||||||||||| | |||||||| | |||||||||
Sbjct: 322 ttggtaaggctggaattgggaaactactctggtgccccccatgatgctcccgaggctctg 263
Query: 256 gcattagctccccggtattctgaggcttatatctgcgtaggtaatgcctttttggcattg 315
| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 262 cccttagctccccggtattctgaggcttatatctgcgtaggtaatgcctttttgcccttg 203
Query: 316 gacaaatttgatttggcagaacagtcatatttagcag-ctttagatatagatcc-ttcga 373
||| ||||||||||| | || | |||||||||| | | |||||||||||||||| |||||
Sbjct: 202 gaccaatttgatttgcccgacccgtcatatttacccgcctttagatatagatccnttcga 143
Query: 374 tccg-tca-ttctaaatcgtt-caaggttcgaatagcaatgcttaaggagaaacttgctg 430
|||| ||| |||||||||||| | ||||||||||| | ||||||||||||||||||||||
Sbjct: 142 tccgctcagttctaaatcgttcccaggttcgaatacccatgcttaaggagaaacttgctg 83
Query: 431 ctgctaataggac 443
|||||||||||||
Sbjct: 82 ctgctaataggac 70