Miyakogusa Predicted Gene

Lj0g3v0094869.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0094869.1 Non Chatacterized Hit- tr|B7FI90|B7FI90_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,65.31,0,AP2,AP2/ERF domain; AP2_ERF,AP2/ERF domain; FAMILY NOT
NAMED,NULL; DNA-binding domain,DNA-binding, i,CUFF.5262.1
         (625 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76056 similar to UniRef100_A9PL75 Cluster: TINY-like ...  1223   0.0  
gnl|LJGI|GO025263 similar to UniRef100_A9PL78 Cluster: TINY-like...    56   3e-07
gnl|LJGI|TC81318 similar to UniRef100_A7P573 Cluster: Chromosome...    54   1e-06

>gnl|LJGI|TC76056 similar to UniRef100_A9PL75 Cluster: TINY-like protein; n=1;
           Populus trichocarpa|Rep: TINY-like protein - Populus
           trichocarpa (Western balsam poplar) (Populus
           balsamiferasubsp. trichocarpa), partial (49%)
          Length = 1274

 Score = 1223 bits (617), Expect = 0.0
 Identities = 623/625 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagtgttgaacctaacaactcagaaacagagtcaaattcaaactcaaagtcatataca 60
           ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 174 atgagtgttgaacctcacaactcagaaacagagtcaaattcaaactcaaattcatataca 233

                                                                       
Query: 61  tcattatcatcatcatcgccaccgcagtccaacaacaacaacacaaagcgcaatcgagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tcattatcatcatcatcgccaccgcagtccaacaacaacaacacaaagcgcaatcgagaa 293

                                                                       
Query: 121 tcgaacacacacgctgtgtacaggggagttcgaatgaggacttgggggaaatgggtgtcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tcgaacacacacgctgtgtacaggggagttcgaatgaggacttgggggaaatgggtgtcc 353

                                                                       
Query: 181 gaaattcgggagccaaggaagaaatcacgcatatggctaggcacgttctgcacgccagaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gaaattcgggagccaaggaagaaatcacgcatatggctaggcacgttctgcacgccagaa 413

                                                                       
Query: 241 atggccgccagagcgcacgacgtggcggctctcagcatcaagggaagcgccgccattctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 atggccgccagagcgcacgacgtggcggctctcagcatcaagggaagcgccgccattctc 473

                                                                       
Query: 301 aacttccctgagctcgcaaacttgctgccgcggccggcgtcgcttgctcctcgtgacgtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aacttccctgagctcgcaaacttgctgccgcggccggcgtcgcttgctcctcgtgacgtt 533

                                                                       
Query: 361 caggctgcagcagcaaaagcggcgcacatggacttcccctctccaacctcctcgttgatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 caggctgcagcagcaaaagcggcgcacatggacttcccctctccaacctcctcgttgatg 593

                                                                       
Query: 421 tcttctgcaatggacatttcctctgcttctgatgagctcagtgagataacagagcttccc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tcttctgcaatggacatttcctctgcttctgatgagctcagtgagataacagagcttccc 653

                                                                       
Query: 481 cgtttggaaaacagtgatgagtgtggcgagctggagaatgagttcgtgttggtggattcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 cgtttggaaaacagtgatgagtgtggcgagctggagaatgagttcgtgttggtggattcc 713

                                                                       
Query: 541 atcgatgagtggatgtttcagccgccatggttgcagaccatggaagatttcgtctggagt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 atcgatgagtggatgtttcagccgccatggttgcagaccatggaagatttcgtctggagt 773

                                    
Query: 601 ggcagagattggggttgtgtgtaat 625
           |||||||||||||||||||||||||
Sbjct: 774 ggcagagattggggttgtgtgtaat 798


>gnl|LJGI|GO025263 similar to UniRef100_A9PL78 Cluster: TINY-like protein; n=1;
           Populus trichocarpa|Rep: TINY-like protein - Populus
           trichocarpa (Western balsam poplar) (Populus
           balsamiferasubsp. trichocarpa), partial (41%)
          Length = 622

 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 139 tacaggggagttcgaatgaggacttgggggaaatgggtgtccgaaattcgggagccaagg 198
           ||||| |||||  |||||||  ||||||| ||||||||||| || ||  |||||||||| 
Sbjct: 120 tacagaggagtgagaatgagagcttggggaaaatgggtgtctgagatcagggagccaaga 179

                               
Query: 199 aagaaatcacgcatatggct 218
           ||||||||| | ||||||||
Sbjct: 180 aagaaatcaagaatatggct 199


>gnl|LJGI|TC81318 similar to UniRef100_A7P573 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (33%)
          Length = 586

 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 276 catcaagggaagcgccgccattctcaacttccctgagctcgca 318
           |||||| |||||| ||||||| |||||||||||||| ||||||
Sbjct: 16  catcaaaggaagctccgccatactcaacttccctgacctcgca 58