Miyakogusa Predicted Gene
- Lj0g3v0094869.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0094869.1 Non Chatacterized Hit- tr|B7FI90|B7FI90_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,65.31,0,AP2,AP2/ERF domain; AP2_ERF,AP2/ERF domain; FAMILY NOT
NAMED,NULL; DNA-binding domain,DNA-binding, i,CUFF.5262.1
(625 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76056 similar to UniRef100_A9PL75 Cluster: TINY-like ... 1223 0.0
gnl|LJGI|GO025263 similar to UniRef100_A9PL78 Cluster: TINY-like... 56 3e-07
gnl|LJGI|TC81318 similar to UniRef100_A7P573 Cluster: Chromosome... 54 1e-06
>gnl|LJGI|TC76056 similar to UniRef100_A9PL75 Cluster: TINY-like protein; n=1;
Populus trichocarpa|Rep: TINY-like protein - Populus
trichocarpa (Western balsam poplar) (Populus
balsamiferasubsp. trichocarpa), partial (49%)
Length = 1274
Score = 1223 bits (617), Expect = 0.0
Identities = 623/625 (99%)
Strand = Plus / Plus
Query: 1 atgagtgttgaacctaacaactcagaaacagagtcaaattcaaactcaaagtcatataca 60
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 174 atgagtgttgaacctcacaactcagaaacagagtcaaattcaaactcaaattcatataca 233
Query: 61 tcattatcatcatcatcgccaccgcagtccaacaacaacaacacaaagcgcaatcgagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tcattatcatcatcatcgccaccgcagtccaacaacaacaacacaaagcgcaatcgagaa 293
Query: 121 tcgaacacacacgctgtgtacaggggagttcgaatgaggacttgggggaaatgggtgtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tcgaacacacacgctgtgtacaggggagttcgaatgaggacttgggggaaatgggtgtcc 353
Query: 181 gaaattcgggagccaaggaagaaatcacgcatatggctaggcacgttctgcacgccagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gaaattcgggagccaaggaagaaatcacgcatatggctaggcacgttctgcacgccagaa 413
Query: 241 atggccgccagagcgcacgacgtggcggctctcagcatcaagggaagcgccgccattctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 atggccgccagagcgcacgacgtggcggctctcagcatcaagggaagcgccgccattctc 473
Query: 301 aacttccctgagctcgcaaacttgctgccgcggccggcgtcgcttgctcctcgtgacgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aacttccctgagctcgcaaacttgctgccgcggccggcgtcgcttgctcctcgtgacgtt 533
Query: 361 caggctgcagcagcaaaagcggcgcacatggacttcccctctccaacctcctcgttgatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 caggctgcagcagcaaaagcggcgcacatggacttcccctctccaacctcctcgttgatg 593
Query: 421 tcttctgcaatggacatttcctctgcttctgatgagctcagtgagataacagagcttccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tcttctgcaatggacatttcctctgcttctgatgagctcagtgagataacagagcttccc 653
Query: 481 cgtttggaaaacagtgatgagtgtggcgagctggagaatgagttcgtgttggtggattcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 cgtttggaaaacagtgatgagtgtggcgagctggagaatgagttcgtgttggtggattcc 713
Query: 541 atcgatgagtggatgtttcagccgccatggttgcagaccatggaagatttcgtctggagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 atcgatgagtggatgtttcagccgccatggttgcagaccatggaagatttcgtctggagt 773
Query: 601 ggcagagattggggttgtgtgtaat 625
|||||||||||||||||||||||||
Sbjct: 774 ggcagagattggggttgtgtgtaat 798
>gnl|LJGI|GO025263 similar to UniRef100_A9PL78 Cluster: TINY-like protein; n=1;
Populus trichocarpa|Rep: TINY-like protein - Populus
trichocarpa (Western balsam poplar) (Populus
balsamiferasubsp. trichocarpa), partial (41%)
Length = 622
Score = 56.0 bits (28), Expect = 3e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 139 tacaggggagttcgaatgaggacttgggggaaatgggtgtccgaaattcgggagccaagg 198
||||| ||||| ||||||| ||||||| ||||||||||| || || ||||||||||
Sbjct: 120 tacagaggagtgagaatgagagcttggggaaaatgggtgtctgagatcagggagccaaga 179
Query: 199 aagaaatcacgcatatggct 218
||||||||| | ||||||||
Sbjct: 180 aagaaatcaagaatatggct 199
>gnl|LJGI|TC81318 similar to UniRef100_A7P573 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 586
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 276 catcaagggaagcgccgccattctcaacttccctgagctcgca 318
|||||| |||||| ||||||| |||||||||||||| ||||||
Sbjct: 16 catcaaaggaagctccgccatactcaacttccctgacctcgca 58