Miyakogusa Predicted Gene

Lj0g3v0094469.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0094469.1 Non Chatacterized Hit- tr|K4C1Z8|K4C1Z8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,59.72,8e-16,
,CUFF.5228.1
         (231 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64256 weakly similar to UniRef100_A7NW07 Cluster: Chr...   458   e-129
gnl|LJGI|TC67650 similar to UniRef100_A7NW07 Cluster: Chromosome...   418   e-117
gnl|LJGI|TC77826 similar to UniRef100_A7NW07 Cluster: Chromosome...   266   5e-71
gnl|LJGI|TC74229 similar to UniRef100_A7NW07 Cluster: Chromosome...    86   1e-16

>gnl|LJGI|TC64256 weakly similar to UniRef100_A7NW07 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (60%)
          Length = 746

 Score =  458 bits (231), Expect = e-129
 Identities = 231/231 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcctctaattggaagaagaccatcacaacaccattcaagaaagcttgcactttaatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atggcctctaattggaagaagaccatcacaacaccattcaagaaagcttgcactttaatt 273

                                                                       
Query: 61  aaccagccaaaaacaagggatcagaagaagtcacaaacagagcaagagaggggtgtgatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaccagccaaaaacaagggatcagaagaagtcacaaacagagcaagagaggggtgtgatg 333

                                                                       
Query: 121 gatcttcagggtgaagtgatggcatgtggctatgaagatgtacaagttatgtggtctatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gatcttcagggtgaagtgatggcatgtggctatgaagatgtacaagttatgtggtctatc 393

                                                              
Query: 181 ctggacaggtcaaaatccaccaggtgcaacatggcttcttcaagctgaacc 231
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctggacaggtcaaaatccaccaggtgcaacatggcttcttcaagctgaacc 444


>gnl|LJGI|TC67650 similar to UniRef100_A7NW07 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (87%)
          Length = 839

 Score =  418 bits (211), Expect = e-117
 Identities = 226/231 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcctctaattggaagaagaccatcacaacaccattcaagaaagcttgcactttaatt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 320 atggcctctaattggaagaagaccatcacaacaccattcaagaaagcttgcactttcatt 379

                                                                       
Query: 61  aaccagccaaaaacaagggatcagaagaagtcacaaacagagcaagagaggggtgtgatg 120
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaccagcaaaaaacaagggatcagaagaagtcacaaacagagcaagagaggggtgtgatg 439

                                                                       
Query: 121 gatcttcagggtgaagtgatggcatgtggctatgaagatgtacaagttatgtggtctatc 180
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 440 gatcttcagggtgaagtgatggcatgtggctatgaagatgttcaagttatgtggtctatc 499

                                                              
Query: 181 ctggacaggtcaaaatccaccaggtgcaacatggcttcttcaagctgaacc 231
           |||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 500 ctggacaggtcaaaatccacaagctgcaacatggcttcttcaagctgaacc 550


>gnl|LJGI|TC77826 similar to UniRef100_A7NW07 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (43%)
          Length = 1110

 Score =  266 bits (134), Expect = 5e-71
 Identities = 134/134 (100%)
 Strand = Plus / Plus

                                                                       
Query: 98  cagagcaagagaggggtgtgatggatcttcagggtgaagtgatggcatgtggctatgaag 157
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 cagagcaagagaggggtgtgatggatcttcagggtgaagtgatggcatgtggctatgaag 751

                                                                       
Query: 158 atgtacaagttatgtggtctatcctggacaggtcaaaatccaccaggtgcaacatggctt 217
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 atgtacaagttatgtggtctatcctggacaggtcaaaatccaccaggtgcaacatggctt 811

                         
Query: 218 cttcaagctgaacc 231
           ||||||||||||||
Sbjct: 812 cttcaagctgaacc 825



 Score =  198 bits (100), Expect = 1e-50
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcctctaattggaagaagaccatcacaacaccattcaagaaagcttgcactttaatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atggcctctaattggaagaagaccatcacaacaccattcaagaaagcttgcactttaatt 251

                                                   
Query: 61  aaccagccaaaaacaagggatcagaagaagtcacaaacag 100
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaccagccaaaaacaagggatcagaagaagtcacaaacag 291


>gnl|LJGI|TC74229 similar to UniRef100_A7NW07 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (81%)
          Length = 622

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                       
Query: 118 atggatcttcagggtgaagtgatggcatgtggctatgaagatgtacaagttatgtggtct 177
           |||||||| || |||||||| ||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 312 atggatctgcaaggtgaagtcatggcatgtggttatgaagatgttcaagtcatgtggtct 371

                                  
Query: 178 atcctggacaggtcaaaatccac 200
           ||||| || | ||| ||||||||
Sbjct: 372 atccttgataagtccaaatccac 394