Miyakogusa Predicted Gene

Lj0g3v0094289.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0094289.1 CUFF.5207.1
         (201 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66577 similar to UniRef100_A1WA37 Cluster: LrgA famil...   345   6e-95

>gnl|LJGI|TC66577 similar to UniRef100_A1WA37 Cluster: LrgA family protein precursor;
           n=1; Acidovorax sp. JS42|Rep: LrgA family protein
           precursor - Acidovorax sp. (strain JS42), partial (15%)
          Length = 787

 Score =  345 bits (174), Expect = 6e-95
 Identities = 192/201 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcatctatgttctaggagtcaattacaactgacttatcatcttttattcaatttgtgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atgcatctatgttctaggagtcaattacaactgacttatcatcttttattcaatttgtgg 181

                                                                       
Query: 61  ttcttttcttgtcctaaccagttcttgatgtccttttttattattagaactccttatttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttcttttcttgtcctaaccagttcttgatgtccttttttattattagaactccttatttg 241

                                                                       
Query: 121 gtttatnnnnnnnnnccatctttttacaatggcggtcaatgttcacagaacatgattata 180
           ||||||         |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtttataaaaaaaaaccatctttttacaatggcggtcaatgttcacagaacatgattata 301

                                
Query: 181 tctatacaagtgtttttctaa 201
           |||||||||||||||||||||
Sbjct: 302 tctatacaagtgtttttctaa 322