Miyakogusa Predicted Gene
- Lj0g3v0093709.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0093709.1 tr|G7J2J8|G7J2J8_MEDTR Myosin-like protein
OS=Medicago truncatula GN=MTR_3g086150 PE=4 SV=1,65.05,0,seg,NULL;
Prefoldin,Prefoldin; Spectrin repeat,NULL;
coiled-coil,NULL,CUFF.5233.1
(5436 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598534 weakly similar to UniRef100_A7QBV6 Cluster: Ch... 1150 0.0
gnl|LJGI|TC75120 similar to UniRef100_A7QBV7 Cluster: Chromosome... 303 6e-81
gnl|LJGI|AV780703 weakly similar to UniRef100_A4TTL5 Cluster: Me... 145 3e-33
>gnl|LJGI|DC598534 weakly similar to UniRef100_A7QBV6 Cluster: Chromosome chr1
scaffold_75, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_75, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 583
Score = 1150 bits (580), Expect = 0.0
Identities = 582/583 (99%)
Strand = Plus / Plus
Query: 2688 ttctgttctgtctaaagagaaagagcaggctcaagtagatagaattactgcagaggcaga 2747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttctgttctgtctaaagagaaagagcaggctcaagtagatagaattactgcagaggcaga 60
Query: 2748 gttagaaaaagctaaagacgaagcagccaggcagacaattgaactagccgaagccaggag 2807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttagaaaaagctaaagacgaagcagccaggcagacaattgaactagccgaagccaggag 120
Query: 2808 gaccataaaggatctagaaggtgaattatctcaggttgagagtgagttcaagttattgac 2867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaccataaaggatctagaaggtgaattatctcaggttgagagtgagttcaagttattgac 180
Query: 2868 tgaaaagtatgatgctgatcaggttgtcaagattgatatggaaaatgaactgaagaagct 2927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaaaagtatgatgctgatcaggttgtcaagattgatatggaaaatgaactgaagaagct 240
Query: 2928 gcgagatgaagatgaaaataatgctagcaaattggtaggtgccttgtcacaggtagaaac 2987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcgagatgaagatgaaaataatgctagcaaattggtaggtgccttgtcacaggtagaaac 300
Query: 2988 agacatttctgttctgtccaaagagaaagagcaggctcaagtagatagaattactgcaga 3047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agacatttctgttctgtccaaagagaaagagcaggctcaagtagatagaattactgcaga 360
Query: 3048 gacagagttagaaaaagctaaagatgaagcagccaggcagacaattgaactagccgaagc 3107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gacagagttagaaaaagctaaagatgaagcagccaggcagacaattgaactagccgaagc 420
Query: 3108 caggaggaccataaaggatctagaaggtgaattttctcaggttgagagtgagttcaattt 3167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caggaggaccataaaggatctagaaggtgaattttctcaggttgagagtgagttcaattt 480
Query: 3168 attgactgaaaagtacgatgctgatcaagttgtcaagattgatatggaaaatgaactaaa 3227
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 481 attgactgaaaagtacgatgctgatcaagttgtcaagattgatatggaaaatgaactana 540
Query: 3228 gaagctgcgagatgaagctgaaaataatgctagcaaattggta 3270
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaagctgcgagatgaagctgaaaataatgctagcaaattggta 583
Score = 517 bits (261), Expect = e-145
Identities = 293/304 (96%)
Strand = Plus / Plus
Query: 2661 tgccttgtcacaggtagaaatagacatttctgttctgtctaaagagaaagagcaggctca 2720
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 280 tgccttgtcacaggtagaaacagacatttctgttctgtccaaagagaaagagcaggctca 339
Query: 2721 agtagatagaattactgcagaggcagagttagaaaaagctaaagacgaagcagccaggca 2780
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 340 agtagatagaattactgcagagacagagttagaaaaagctaaagatgaagcagccaggca 399
Query: 2781 gacaattgaactagccgaagccaggaggaccataaaggatctagaaggtgaattatctca 2840
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 400 gacaattgaactagccgaagccaggaggaccataaaggatctagaaggtgaattttctca 459
Query: 2841 ggttgagagtgagttcaagttattgactgaaaagtatgatgctgatcaggttgtcaagat 2900
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 460 ggttgagagtgagttcaatttattgactgaaaagtacgatgctgatcaagttgtcaagat 519
Query: 2901 tgatatggaaaatgaactgaagaagctgcgagatgaagatgaaaataatgctagcaaatt 2960
|||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 520 tgatatggaaaatgaactanagaagctgcgagatgaagctgaaaataatgctagcaaatt 579
Query: 2961 ggta 2964
||||
Sbjct: 580 ggta 583
Score = 492 bits (248), Expect = e-137
Identities = 275/284 (96%)
Strand = Plus / Plus
Query: 2994 ttctgttctgtccaaagagaaagagcaggctcaagtagatagaattactgcagagacaga 3053
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ttctgttctgtctaaagagaaagagcaggctcaagtagatagaattactgcagaggcaga 60
Query: 3054 gttagaaaaagctaaagatgaagcagccaggcagacaattgaactagccgaagccaggag 3113
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttagaaaaagctaaagacgaagcagccaggcagacaattgaactagccgaagccaggag 120
Query: 3114 gaccataaaggatctagaaggtgaattttctcaggttgagagtgagttcaatttattgac 3173
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 121 gaccataaaggatctagaaggtgaattatctcaggttgagagtgagttcaagttattgac 180
Query: 3174 tgaaaagtacgatgctgatcaagttgtcaagattgatatggaaaatgaactaaagaagct 3233
||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 tgaaaagtatgatgctgatcaggttgtcaagattgatatggaaaatgaactgaagaagct 240
Query: 3234 gcgagatgaagctgaaaataatgctagcaaattggtaggtgcct 3277
||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 gcgagatgaagatgaaaataatgctagcaaattggtaggtgcct 284
>gnl|LJGI|TC75120 similar to UniRef100_A7QBV7 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 520
Score = 303 bits (153), Expect = 6e-81
Identities = 156/157 (99%)
Strand = Plus / Plus
Query: 5280 ttttgtaccaaaacaaggaaaagtaattgcagatcgtattgatggaatctgggtatctgg 5339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ttttgtaccaaaacaaggaaaagtaattgcagatcgtattgatggaatctgggtatctgg 64
Query: 5340 tagtcgggttctgatgagtcgtcccagagcaagattaggaatcattggttatttgctcat 5399
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 taatcgggttctgatgagtcgtcccagagcaagattaggaatcattggttatttgctcat 124
Query: 5400 catgcatttatggctactgggggcgatcttgtagaaa 5436
|||||||||||||||||||||||||||||||||||||
Sbjct: 125 catgcatttatggctactgggggcgatcttgtagaaa 161
>gnl|LJGI|AV780703 weakly similar to UniRef100_A4TTL5 Cluster: Membrane protein; n=1;
Magnetospirillum gryphiswaldense|Rep: Membrane protein -
Magnetospirillum gryphiswaldense, partial (6%)
Length = 454
Score = 145 bits (73), Expect = 3e-33
Identities = 88/93 (94%)
Strand = Plus / Minus
Query: 5344 cgggttctgatgagtcgtcccagagcaagattaggaatcattggttatttgctcatcatg 5403
||||||||||||||||||||| || | |||||||||||||||||||||||||||||||
Sbjct: 454 cgggttctgatgagtcgtccccgacccagattaggaatcattggttatttgctcatcagc 395
Query: 5404 catttatggctactgggggcgatcttgtagaaa 5436
|||||||||||||||||||||||||||||||||
Sbjct: 394 catttatggctactgggggcgatcttgtagaaa 362