Miyakogusa Predicted Gene

Lj0g3v0093619.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0093619.1 Non Chatacterized Hit- tr|I1MNQ9|I1MNQ9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,72.46,0,DEAD-like
helicases superfamily,Helicase, superfamily 1/2, ATP-binding domain;
P-loop containing nuc,CUFF.5158.1
         (695 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO028241 similar to UniRef100_Q3EBD3 Cluster: DEAD-box ...   466   e-131
gnl|LJGI|TC59477 similar to UniRef100_Q3EBD3 Cluster: DEAD-box A...   416   e-116
gnl|LJGI|TC64320 weakly similar to UniRef100_Q0E2Z7 Cluster: DEA...   196   1e-49

>gnl|LJGI|GO028241 similar to UniRef100_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA
           helicase 41; n=2; Arabidopsis thaliana|Rep: DEAD-box
           ATP-dependent RNA helicase 41 - Arabidopsis thaliana
           (Mouse-ear cress), partial (34%)
          Length = 914

 Score =  466 bits (235), Expect = e-131
 Identities = 238/239 (99%)
 Strand = Plus / Minus

                                                                       
Query: 358 aagcatgagattgacttagatgatgtgaagactttagttgtggatgaggtggactgcatg 417
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 aagcacgagattgacttagatgatgtgaagactttagttgtggatgaggtggactgcatg 855

                                                                       
Query: 418 ctgcaaaggggttttcgagaccaggtcttgcagatatatcaagctttgtcacaacctcag 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 ctgcaaaggggttttcgagaccaggtcttgcagatatatcaagctttgtcacaacctcag 795

                                                                       
Query: 478 gtcttgatgtttactgcaacaataactagtgacatagaaaaaatggcaaactctctggca 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gtcttgatgtttactgcaacaataactagtgacatagaaaaaatggcaaactctctggca 735

                                                                      
Query: 538 aaagacattgcggttgtaactgttgggaatcctaattgtccaaataaggcggtcaagca 596
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 aaagacattgcggttgtaactgttgggaatcctaattgtccaaataaggcggtcaagca 676



 Score = 71.9 bits (36), Expect = 5e-12
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                               
Query: 660 gcagatctcctggcggatacgattaaagttgtgatt 695
           ||||||||||||||||||||||||||||||||||||
Sbjct: 678 gcagatctcctggcggatacgattaaagttgtgatt 643


>gnl|LJGI|TC59477 similar to UniRef100_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA
           helicase 41; n=2; Arabidopsis thaliana|Rep: DEAD-box
           ATP-dependent RNA helicase 41 - Arabidopsis thaliana
           (Mouse-ear cress), partial (25%)
          Length = 751

 Score =  416 bits (210), Expect = e-116
 Identities = 210/210 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagcagcaggatatgacaagcctacccctgtccaaatgcaagcaatccctattgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atggaagcagcaggatatgacaagcctacccctgtccaaatgcaagcaatccctattgct 601

                                                                       
Query: 61  ttgaaggggacaaacttgcttgttttagctgatacaggatcaggaaagactgattccttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttgaaggggacaaacttgcttgttttagctgatacaggatcaggaaagactgattccttt 661

                                                                       
Query: 121 cttattccaatagtttctgaatgtgggattcaacgtctgctgtatgatccaaataagaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cttattccaatagtttctgaatgtgggattcaacgtctgctgtatgatccaaataagaag 721

                                         
Query: 181 aagcctttagctatagtgttatcacctacc 210
           ||||||||||||||||||||||||||||||
Sbjct: 722 aagcctttagctatagtgttatcacctacc 751


>gnl|LJGI|TC64320 weakly similar to UniRef100_Q0E2Z7 Cluster: DEAD-box ATP-dependent
           RNA helicase 41; n=1; Oryza sativa Japonica Group|Rep:
           DEAD-box ATP-dependent RNA helicase 41 - Oryza sativa
           subsp. japonica (Rice), partial (32%)
          Length = 765

 Score =  196 bits (99), Expect = 1e-49
 Identities = 99/99 (100%)
 Strand = Plus / Plus

                                                                       
Query: 597 atcatgcgaagtgaacaacattttaagccacctgttgtcatatatgtcggctccagaatc 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atcatgcgaagtgaacaacattttaagccacctgttgtcatatatgtcggctccagaatc 172

                                                  
Query: 657 ggggcagatctcctggcggatacgattaaagttgtgatt 695
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ggggcagatctcctggcggatacgattaaagttgtgatt 211



 Score =  125 bits (63), Expect = 4e-28
 Identities = 63/63 (100%)
 Strand = Plus / Plus

                                                                       
Query: 534 ggcaaaagacattgcggttgtaactgttgggaatcctaattgtccaaataaggcggtcaa 593
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggcaaaagacattgcggttgtaactgttgggaatcctaattgtccaaataaggcggtcaa 60

              
Query: 594 gca 596
           |||
Sbjct: 61  gca 63