Miyakogusa Predicted Gene

Lj0g3v0093479.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0093479.1 Non Chatacterized Hit- tr|I1JDA0|I1JDA0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,87.66,0,MA3,Initiation factor eIF-4 gamma, MA3; seg,NULL;
SUBFAMILY NOT NAMED,NULL; PROGRAMMED CELL DEATH 4,,CUFF.5141.1
         (2163 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AU088784 similar to UniRef100_A7QRM7 Cluster: Chromosom...   436   e-121

>gnl|LJGI|AU088784 similar to UniRef100_A7QRM7 Cluster: Chromosome undetermined
            scaffold_151, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_151, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (7%)
          Length = 359

 Score =  436 bits (220), Expect = e-121
 Identities = 301/319 (94%), Gaps = 8/319 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1011 ggaaaggcgccaagcagaaactccgctactagacctgttgaaggaggcagctgaagaa-g 1069
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8    ggaaaggcgccaagcagaaactccgctactagacctgttgaaggaggcagctgaagaaag 67

                                                                        
Query: 1070 gttttattaacaccagccaaatgtctaaagggttcagtagattgattgacactgttgatg 1129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68   gttttattaacaccagccaaatgtctaaagggttcagtagattgattgacactgttgatg 127

                                                                        
Query: 1130 acttatcactcgacataccgaatgcgcac-ggaatactgcaggaactaatgtctaaagca 1188
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 128  acttatcactcgacataccgaatgcgcacgggaatactgcaggaactaatgtctaaagca 187

                                                                        
Query: 1189 gcatctg-agggttggttgtgtgtgtcatctttgaaaccacttacagt-ggagcctgaaa 1246
             |||||| |||||||||||||||||||||||||||||||||||||||| ||| ||| |||
Sbjct: 188  ncatctgaagggttggttgtgtgtgtcatctttgaaaccacttacagtgggaacctnaaa 247

                                                                        
Query: 1247 agaattcaatcaaag-acagtgctgctagaag-ttttaagctaaagactcagtccatcat 1304
            ||||||||||||||| ||| |||||||| ||  |||||||||||| || | |||||||||
Sbjct: 248  agaattcaatcaaagaacantgctgctaaaantttttaagctaaanac-ccgtccatcat 306

                               
Query: 1305 t-caagagtactttttatc 1322
            | ||| | |||||||||||
Sbjct: 307  tccaaaaatactttttatc 325