Miyakogusa Predicted Gene
- Lj0g3v0093459.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0093459.1 Non Chatacterized Hit- tr|I1HCS0|I1HCS0_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,36.9,4e-17,
,CUFF.5142.1
(522 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO036733 weakly similar to UniRef100_A7QRM6 Cluster: Ch... 731 0.0
gnl|LJGI|TC64792 weakly similar to UniRef100_A7QRM6 Cluster: Chr... 92 4e-18
>gnl|LJGI|GO036733 weakly similar to UniRef100_A7QRM6 Cluster: Chromosome undetermined
scaffold_151, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_151,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (84%)
Length = 791
Score = 731 bits (369), Expect = 0.0
Identities = 369/369 (100%)
Strand = Plus / Plus
Query: 154 gatattctcgataaacatggatttaagtccctctacgccttcaaccctcaatttcgtagt 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gatattctcgataaacatggatttaagtccctctacgccttcaaccctcaatttcgtagt 306
Query: 214 cgcggtgttcctgttcggttcaaccctcgcaatggaaggtcgctattgacttatagggat 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cgcggtgttcctgttcggttcaaccctcgcaatggaaggtcgctattgacttatagggat 366
Query: 274 ggtgttgttgtttatcttgatggtgaacctaaggactcactagttcaaccagtgactagg 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ggtgttgttgtttatcttgatggtgaacctaaggactcactagttcaaccagtgactagg 426
Query: 334 attttaattggggttgctgttgtaaccctcatgataacaatactttcaagggatacccca 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 attttaattggggttgctgttgtaaccctcatgataacaatactttcaagggatacccca 486
Query: 394 gaatggatgaagaaattaaacgtttcttctgtaaacttccctccatggatcttagcttgt 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gaatggatgaagaaattaaacgtttcttctgtaaacttccctccatggatcttagcttgt 546
Query: 454 gtagttattgtcttcacccgcatgaggaagagaactaaagattttctgaagaggcgtggt 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gtagttattgtcttcacccgcatgaggaagagaactaaagattttctgaagaggcgtggt 606
Query: 514 tggtgaatg 522
|||||||||
Sbjct: 607 tggtgaatg 615
Score = 293 bits (148), Expect = 6e-79
Identities = 151/152 (99%)
Strand = Plus / Plus
Query: 1 atggaggaggaaaaagcacccttaatcggagaaatcgaagaaacaagccaagtttccaac 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 52 atggaggaggaaaaagcacccttaatcggagaaatcgaaggaacaagccaagtttccaac 111
Query: 61 accaccgagagcgagaggcatgttcggacgaaggtaccggaggtggagatccacttgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 accaccgagagcgagaggcatgttcggacgaaggtaccggaggtggagatccacttgttc 171
Query: 121 cggcagggtaagggtccggtggcggtgttcaa 152
||||||||||||||||||||||||||||||||
Sbjct: 172 cggcagggtaagggtccggtggcggtgttcaa 203
>gnl|LJGI|TC64792 weakly similar to UniRef100_A7QRM6 Cluster: Chromosome undetermined
scaffold_151, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_151,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (46%)
Length = 694
Score = 91.7 bits (46), Expect = 4e-18
Identities = 88/102 (86%)
Strand = Plus / Minus
Query: 384 ggataccccagaatggatgaagaaattaaacgtttcttctgtaaacttccctccatggat 443
||||| ||| || ||||| ||||| || ||||||||| ||| |||||| |||| |||||
Sbjct: 291 ggatatcccggagtggatcaagaatttcaacgtttctggtgtgaacttctctccgtggat 232
Query: 444 cttagcttgtgtagttattgtcttcacccgcatgaggaagag 485
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 231 agtagcttgtgtagttattgttttcacccgcatgaggaagag 190