Miyakogusa Predicted Gene

Lj0g3v0093439.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0093439.1 tr|Q7XM15|Q7XM15_ORYSJ OSJNBa0084K01.16 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0084K01.16
,100,0,PHF5,PHF5-like; FAMILY NOT NAMED,PHF5-like,CUFF.5138.1
         (334 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60632 homologue to UniRef100_A9SQ72 Cluster: Predicte...   504   e-142

>gnl|LJGI|TC60632 homologue to UniRef100_A9SQ72 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, complete
          Length = 752

 Score =  504 bits (254), Expect = e-142
 Identities = 314/334 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccaagcatcatcctgatttgattatgtgtcggaagcaacctggcatcgccattgga 60
           |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 109 atggccaagcatcatcctgatttgattatgtgccggaagcaacctggaatcgccattgga 168

                                                                       
Query: 61  cgattgtgtgaaaaatgcgatggcaagtgtgtgatatgcgactcatatgtgcgtccttgt 120
           ||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||||
Sbjct: 169 cgattgtgtgaaaaatgtgatggcaagtgtgtgatctgtgattcatatgtgcgtccttgt 228

                                                                       
Query: 121 acactagtccgggtttgtgatgagtgcaactatggatcatttcaaggtcgatgtgtgata 180
           ||||| ||||| ||||| ||||| |||||||| ||||||||||| |||||||| || || 
Sbjct: 229 acacttgtccgagtttgcgatgaatgcaactacggatcatttcagggtcgatgcgtcatt 288

                                                                       
Query: 181 tgtggaggagtaggaatatctgatgcttactactgcaaggagtgcacacaacaagagaaa 240
           |||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 289 tgtggaggagtaggaatatctgatgcctactactgcaaggaatgcacacaacaggagaaa 348

                                                                       
Query: 241 gacagggatggttgccccaaaattgtcaatttagggagtgccaaaactgatttattctat 300
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 349 gacagggatggttgccccaaaattgttaatttagggagtgccaaaactgatttattctac 408

                                             
Query: 301 gaacgcaaaaagtatggttttaagaaaagatgat 334
           ||||||||||||||||||||||||||||||||||
Sbjct: 409 gaacgcaaaaagtatggttttaagaaaagatgat 442