Miyakogusa Predicted Gene

Lj0g3v0092809.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0092809.1 Non Chatacterized Hit- tr|I1LM87|I1LM87_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,23.94,3e-18,PGR3 (PROTON GRADIENT REGULATION 3),NULL; FAMILY NOT
NAMED,NULL; PPR: pentatricopeptide repeat domai,CUFF.5090.1
         (1387 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW597112 weakly similar to UniRef100_A7QJF8 Cluster: Ch...   654   0.0  

>gnl|LJGI|BW597112 weakly similar to UniRef100_A7QJF8 Cluster: Chromosome chr8
           scaffold_106, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_106, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (6%)
          Length = 484

 Score =  654 bits (330), Expect = 0.0
 Identities = 336/338 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatccgctgccacgccaaggcaaactcgccgccgtcagagtcgattgccatttactcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atgatccgctgccacgccaaggcaaactcgccgccgtcagagtcgattgccatttactcc 206

                                                                       
Query: 61  gccatgctgcggcggcggcgtttcgtcaagcccaaccagcataccttcaccttcgctctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gccatgctgcggcggcggcgtttcgtcaagcccaaccagcataccttcaccttcgctctc 266

                                                                       
Query: 121 cacgcgtgtactaaacgcgccgcctcgggattgggctcaggggttcaggttcacgcccat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cacgcgtgtactaaacgcgccgcctcgggattgggctcaggggttcaggttcacgcccat 326

                                                                       
Query: 181 gtggtcaagcttggtttcgcgcgcgatgttttcgttcggaacgcgttgattcacttgtac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gtggtcaagcttggtttcgcgcgcgatgttttcgttcggaacgcgttgattcacttgtac 386

                                                                       
Query: 241 tgtgagtgtggttccagcgttgagagtttcaaaagggttttcgaggaagaggaagatacc 300
           |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgtgagtgtggttctagcgtcgagagtttcaaaagggttttcgaggaagaggaagatacc 446

                                                 
Query: 301 ctttgcagtgatgtggtcacgtggaactccgtgttggc 338
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctttgcagtgatgtggtcacgtggaactccgtgttggc 484