Miyakogusa Predicted Gene

Lj0g3v0092249.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0092249.1 Non Chatacterized Hit- tr|Q56WQ5|Q56WQ5_ARATH
Putative uncharacterized protein At1g19400
OS=Arabidop,70,3e-17,seg,NULL; 2-HYDROXYACID DEHYDROGENASE,NULL;
2-HYDROXYACID DEHYDROGENASE-RELATED,NULL,CUFF.5046.1
         (951 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77873 similar to UniRef100_A7P916 Cluster: Chromosome...    52   6e-06
gnl|LJGI|TC68600 similar to UniRef100_A7P916 Cluster: Chromosome...    52   6e-06

>gnl|LJGI|TC77873 similar to UniRef100_A7P916 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 600

 Score = 52.0 bits (26), Expect = 6e-06
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 802 gaagagggtgaactatcatggtttaatgctggtgtaagagttggtgttgg 851
           ||||| || ||||| |||||||||||||||||||| || || ||||||||
Sbjct: 201 gaagatggagaactttcatggtttaatgctggtgttagggtgggtgttgg 250


>gnl|LJGI|TC68600 similar to UniRef100_A7P916 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (38%)
          Length = 750

 Score = 52.0 bits (26), Expect = 6e-06
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 802 gaagagggtgaactatcatggtttaatgctggtgtaagagttggtgttgg 851
           ||||| || ||||| |||||||||||||||||||| || || ||||||||
Sbjct: 409 gaagatggagaactttcatggtttaatgctggtgttagggtgggtgttgg 458