Miyakogusa Predicted Gene
- Lj0g3v0092229.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0092229.2 Non Chatacterized Hit- tr|A5BYP2|A5BYP2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.58,0.000000000003,no description,NULL; Toll/Interleukin
receptor TIR domain,Toll/interleukin-1 receptor homology
(TIR),CUFF.5051.2
(1047 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62281 weakly similar to UniRef100_A3QVH1 Cluster: Tol... 553 e-157
gnl|LJGI|DC599828 weakly similar to UniRef100_A7PQ23 Cluster: Ch... 127 2e-28
gnl|LJGI|FS326348 weakly similar to UniRef100_A7QH65 Cluster: Ch... 103 2e-21
gnl|LJGI|TC74331 weakly similar to UniRef100_A7PQ07 Cluster: Chr... 101 9e-21
gnl|LJGI|TC74896 weakly similar to UniRef100_A3QVH1 Cluster: Tol... 84 2e-15
gnl|LJGI|TC78027 weakly similar to UniRef100_Q19PJ3 Cluster: TIR... 82 8e-15
gnl|LJGI|TC73355 similar to UniRef100_A3QVH0 Cluster: Toll inter... 82 8e-15
gnl|LJGI|TC66646 weakly similar to UniRef100_A7QBR7 Cluster: Chr... 66 5e-10
gnl|LJGI|GO011648 weakly similar to UniRef100_A7PQ15 Cluster: Ch... 52 7e-06
>gnl|LJGI|TC62281 weakly similar to UniRef100_A3QVH1 Cluster: Toll interleukin
receptor; n=1; Phaseolus vulgaris|Rep: Toll interleukin
receptor - Phaseolus vulgaris (Kidney bean) (French
bean), partial (69%)
Length = 1578
Score = 553 bits (279), Expect = e-157
Identities = 656/782 (83%), Gaps = 6/782 (0%)
Strand = Plus / Plus
Query: 266 atgaacttgcccaaatccttgaatataggaagaccaagagtcaactgattatgcccatct 325
|||||||| |||| |||||||||| |||| |||| |||| |||| |||| | || ||||
Sbjct: 429 atgaacttacccagatccttgaatgtagggagacaaagaatcaagtgatcctcccaatct 488
Query: 326 tttacgacgtcgatccgtccgatgtaaggcgtcaaactggatcatatggtgaagccatgg 385
|||||||||||||||| ||||||||||||||||||||||| ||||| || ||| ||||||
Sbjct: 489 tttacgacgtcgatccatccgatgtaaggcgtcaaactggttcatacggagaatccatgg 548
Query: 386 ctgctcatgaacacaggtttggaaaggactccttggttttgcagaaatggaggtcagctt 445
||| |||| ||| ||| ||||||| | | |||| ||||||||||||||||
Sbjct: 549 ctgttcatt------ggtatggggaggactctgagagtgtgcataaatggaggtcagctt 602
Query: 446 tgtctcaagttgcagagatgagtggatggtgtttcaaaattgggtacggctttgaatatg 505
|||| || ||||||| || ||||||| ||||| ||||||| | |||| ||||||
Sbjct: 603 tgtccaaaattgcagaattgcctggatggcatttcagaattgggaagggctacgaatata 662
Query: 506 aaatcatcgaacggattgtagaacaggttacccaattggtgcctcgctatgatgtttttc 565
|| | ||| ||| ||||||||| |||| | | || ||| ||||||||||||||||||||
Sbjct: 663 aagtgatccaacagattgtagacaaggtcatcaaaatggcgcctcgctatgatgtttttc 722
Query: 566 tcagtttctgtggaaaagatacccgctactccttcacaggctttctatataacgccttga 625
|||||||||||||||||||||| ||||| |||| ||||||||||| ||| ||||||| |
Sbjct: 723 tcagtttctgtggaaaagatacgcgctatacctttacaggctttctctatgacgccttca 782
Query: 626 gccaggagggatttgaaaccttcatgaatgatgaggaaatggaagaaggggaccaaattt 685
||| ||||||||| || ||||||||||||||||| | ||| ||||||||||||||||
Sbjct: 783 gccgggagggattcaaagtcttcatgaatgatgaggtatcggaggaaggggaccaaattt 842
Query: 686 cacaagcactcattacagcaattgaaaaatcaagactttcaatcattgttttttctgaaa 745
|| || | |||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 843 cagaacctctcattacagcaatagaaaaatcaaggttttcaatcattgttttttctgaaa 902
Query: 746 actatgcatattcctcattgtgtcttgatgagcttatcacgatccttgactgtatgaaga 805
|||||||||||||||| ||||||||||||| || | |||||||||||| | |||||
Sbjct: 903 actatgcatattcctcgttgtgtcttgatgtactcgctaagatccttgactggaagaaga 962
Query: 806 taaaaagtcaattggtttggcctatcttttataaagtggaaccgtctgatttaagacatc 865
||| |||||||||||||||||||||||| ||| | ||||| |||||||| ||||||
Sbjct: 963 ccaaagatcaattggtttggcctatcttttacaaaatagaaccttctgatttgcgacatc 1022
Query: 866 aaagaaagtgttatggcacagccatggttgaacatgaaaatagacttggaaaggactctg 925
|||||||| |||| | |||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 1023 aaagaaagagttacgacacagccatgacagaacatgaaaatagatttggaaaggactcta 1082
Query: 926 agaagttgcaaatttggagattagctttgtttgaagccgccaacttaaaaggatggcact 985
| ||| || ||| ||||||| | |||||| | | ||||||||||||||||||||| |||
Sbjct: 1083 aaaaggtgaaaaactggagatcaactttgtataatgccgccaacttaaaaggatggtact 1142
Query: 986 taaaaaccgggtatgaatacgagtttatcgataagttggtggaaatggccattaaaattt 1045
| |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||
Sbjct: 1143 tgaaaaccgggtatgagtacgagtttatcgaaaaattggtggaaatggccataaaaattt 1202
Query: 1046 aa 1047
||
Sbjct: 1203 aa 1204
>gnl|LJGI|DC599828 weakly similar to UniRef100_A7PQ23 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 539
Score = 127 bits (64), Expect = 2e-28
Identities = 255/319 (79%)
Strand = Plus / Plus
Query: 643 accttcatgaatgatgaggaaatggaagaaggggaccaaatttcacaagcactcattaca 702
||||||||| |||||| || | |||| | || ||||| ||||||||| | || || ||
Sbjct: 195 accttcatggatgatgggggattggagggtggcgaccagatttcacaaactcttatcact 254
Query: 703 gcaattgaaaaatcaagactttcaatcattgttttttctgaaaactatgcatattcctca 762
||||||||| |||||| ||||| || |||||| | |||||||| |||||| | ||| ||
Sbjct: 255 gcaattgaagcatcaaggctttctattattgttctatctgaaaattatgcaaaatccgca 314
Query: 763 ttgtgtcttgatgagcttatcacgatccttgactgtatgaagataaaaagtcaattggtt 822
| |||||||||||| ||| ||| |||| | || |||||||||| ||| | |||||| |||
Sbjct: 315 tggtgtcttgatgaacttgtcaagatcgtggagtgtatgaagacaaagaatcaattagtt 374
Query: 823 tggcctatcttttataaagtggaaccgtctgatttaagacatcaaagaaagtgttatggc 882
||||| |||||||| || |||||||| || ||| ||||| |||| | ||| |||| ||
Sbjct: 375 tggccaatcttttacaaggtggaaccatcagatgtaagatatcagaaaaatagttacgga 434
Query: 883 acagccatggttgaacatgaaaatagacttggaaaggactctgagaagttgcaaatttgg 942
||||||||||| |||| |||||||| ||| || || ||||||||| | | || |||
Sbjct: 435 gaagccatggttgcacataaaaatagatttgtgaatgattctgagaagattcnaagatgg 494
Query: 943 agattagctttgtttgaag 961
|| ||||||||||||||||
Sbjct: 495 aggttagctttgtttgaag 513
>gnl|LJGI|FS326348 weakly similar to UniRef100_A7QH65 Cluster: Chromosome chr18
scaffold_96, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_96, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 817
Score = 103 bits (52), Expect = 2e-21
Identities = 187/232 (80%)
Strand = Plus / Plus
Query: 545 tgcctcgctatgatgtttttctcagtttctgtggaaaagatacccgctactccttcacag 604
||||||||| ||||||||| ||||||||| | || ||||||| || |||||||| || |
Sbjct: 580 tgcctcgctttgatgttttcctcagtttcagcggggaagatactcggtactcctttacgg 639
Query: 605 gctttctatataacgccttgagccaggagggatttgaaaccttcatgaatgatgaggaaa 664
| ||||| ||| |||| ||| | || |||||||| ||||||| ||| |||||||||||
Sbjct: 640 gatttctttatcacgcgttgcgtcaagagggattcaaaacctttatggatgatgaggaat 699
Query: 665 tggaagaaggggaccaaatttcacaagcactcattacagcaattgaaaaatcaagacttt 724
|||| | ||| |||| |||||| | | ||| | |||||||||||||| || ||||
Sbjct: 700 tggagggcgggaaccagatttcaaatactctcctggaggcaattgaaaaatcgaggcttt 759
Query: 725 caatcattgttttttctgaaaactatgcatattcctcattgtgtcttgatga 776
|||| ||||||| ||||||||||||| ||| ||| ||| ||||||||||||
Sbjct: 760 caattgttgttttctctgaaaactatggatactccacatggtgtcttgatga 811
>gnl|LJGI|TC74331 weakly similar to UniRef100_A7PQ07 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 811
Score = 101 bits (51), Expect = 9e-21
Identities = 213/267 (79%)
Strand = Plus / Plus
Query: 643 accttcatgaatgatgaggaaatggaagaaggggaccaaatttcacaagcactcattaca 702
||||||||| |||||| |||| |||| || ||||| ||||||||| | || ||||
Sbjct: 141 accttcatggatgatggggaattggagtgcggcgaccagatttcacaaactcttattaac 200
Query: 703 gcaattgaaaaatcaagactttcaatcattgttttttctgaaaactatgcatattcctca 762
||||||||| |||||||||||| || |||||| | |||||||| ||||| | || ||
Sbjct: 201 gcaattgaagcatcaagactttccattattgttctatctgaaaattatgcgaaatctgca 260
Query: 763 ttgtgtcttgatgagcttatcacgatccttgactgtatgaagataaaaagtcaattggtt 822
| |||||||||||| ||| | |||||| || ||||||| || || | |||||| |||
Sbjct: 261 tggtgtcttgatgaacttgataagatcctggagtgtatgacgacgaagaatcaattagtt 320
Query: 823 tggcctatcttttataaagtggaaccgtctgatttaagacatcaaagaaagtgttatggc 882
||||| |||||||||||||||||||| || ||| ||||| |||| | ||| |||||||
Sbjct: 321 tggccaatcttttataaagtggaaccatcagatgtaagatatcagaaaaatagttatgga 380
Query: 883 acagccatggttgaacatgaaaataga 909
|||||||| || |||||||||||||
Sbjct: 381 gaagccatggatgcacatgaaaataga 407
>gnl|LJGI|TC74896 weakly similar to UniRef100_A3QVH1 Cluster: Toll interleukin
receptor; n=1; Phaseolus vulgaris|Rep: Toll interleukin
receptor - Phaseolus vulgaris (Kidney bean) (French
bean), partial (31%)
Length = 701
Score = 83.8 bits (42), Expect = 2e-15
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 703 gcaattgaaaaatcaagactttcaatcattgttttttctgaaaactatgcatattcctca 762
|||| |||||||||||| ||||| || |||||||||||||| || |||| ||||||||||
Sbjct: 94 gcaagtgaaaaatcaaggctttccattattgttttttctgagaattatggatattcctca 153
Query: 763 ttgtgtcttgatga 776
| ||||||||||||
Sbjct: 154 tggtgtcttgatga 167
>gnl|LJGI|TC78027 weakly similar to UniRef100_Q19PJ3 Cluster: TIR-NBS-LRR type
disease resistance protein; n=1; Populus
trichocarpa|Rep: TIR-NBS-LRR type disease resistance
protein - Populus trichocarpa (Western balsam poplar)
(Populus balsamiferasubsp. trichocarpa), partial (8%)
Length = 1162
Score = 81.8 bits (41), Expect = 8e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 704 caattgaaaaatcaagactttcaatcattgttttttctgaaaactatgcatattcctcat 763
|||||||||||||||| ||||| || ||||||| |||||||||||||||||||| ||||
Sbjct: 705 caattgaaaaatcaaggctttcgattgttgttttctctgaaaactatgcatattcttcat 764
Query: 764 tgtgtcttgatga 776
|||||| |||||
Sbjct: 765 ggtgtctcgatga 777
>gnl|LJGI|TC73355 similar to UniRef100_A3QVH0 Cluster: Toll interleukin receptor;
n=1; Phaseolus vulgaris|Rep: Toll interleukin receptor -
Phaseolus vulgaris (Kidney bean) (French bean), partial
(19%)
Length = 484
Score = 81.8 bits (41), Expect = 8e-15
Identities = 179/225 (79%)
Strand = Plus / Plus
Query: 698 ttacagcaattgaaaaatcaagactttcaatcattgttttttctgaaaactatgcatatt 757
|||||||||||||||| ||||| ||||| || ||||||| |||||||| ||||||||||
Sbjct: 260 ttacagcaattgaaaattcaaggctttcgattgttgttttgtctgaaaattatgcatatt 319
Query: 758 cctcattgtgtcttgatgagcttatcacgatccttgactgtatgaagataaaaagtcaat 817
| || | ||||| ||||| ||| | ||| |||||| || ||||| ||| ||
Sbjct: 320 cttcttcatgtctagatgaacttgctatgattcttgaccgtgtgaaggaccaaaaccata 379
Query: 818 tggtttggcctatcttttataaagtggaaccgtctgatttaagacatcaaagaaagtgtt 877
||||||||||||| || ||||| |||| || || || |||||||||||||||| |||
Sbjct: 380 tggtttggcctattttctataagttggagccatcagaggtaagacatcaaagaaatagtt 439
Query: 878 atggcacagccatggttgaacatgaaaatagacttggaaaggact 922
||| || ||||||| |||||||||||||| | ||||||| ||||
Sbjct: 440 atgacaaagccatgactgaacatgaaaataaatttggaaaagact 484
>gnl|LJGI|TC66646 weakly similar to UniRef100_A7QBR7 Cluster: Chromosome chr1
scaffold_75, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_75, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 616
Score = 65.9 bits (33), Expect = 5e-10
Identities = 119/147 (80%), Gaps = 3/147 (2%)
Strand = Plus / Minus
Query: 833 tttataaagtggaaccgtctgatttaagacatcaaagaaagtgttatggcacagccatgg 892
|||| |||||||||||||||||| || ||| |||||||| ||||||||| |||||||
Sbjct: 523 tttacaaagtggaaccgtctgatatacaacagcaaagaaatagttatggcaaagccatga 464
Query: 893 ttgaacatgaaaatag---acttggaaaggactctgagaagttgcaaatttggagattag 949
| | ||||||||||| ||| ||||| |||||| | || ||||| ||||||||||
Sbjct: 463 ctaatcatgaaaataggctactgggaaaagactctcataaagtgcaagaatggagattag 404
Query: 950 ctttgtttgaagccgccaacttaaaag 976
|||||| ||||| |||||||| ||||
Sbjct: 403 ctttgtcagaagctgccaacttgaaag 377
>gnl|LJGI|GO011648 weakly similar to UniRef100_A7PQ15 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 722
Score = 52.0 bits (26), Expect = 7e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 703 gcaattgaaaaatcaagactttcaatcattgttttttctgaaaactatgcatattcctca 762
||||||||||| |||| ||||||||| ||| |||| ||| |||| | |||| | ||| |
Sbjct: 401 gcaattgaaaattcaaaactttcaattattattttctctcaaaattttgcagactccacc 460
Query: 763 ttgtgtcttgatgagctt 780
| ||||||||||||||||
Sbjct: 461 tggtgtcttgatgagctt 478