Miyakogusa Predicted Gene
- Lj0g3v0091689.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0091689.1 tr|E9LK41|E9LK41_VITVI Copper transporter
OS=Vitis vinifera GN=CTr4 PE=2 SV=1,41.67,2e-19,seg,NULL; Ctr,Ctr
copper transporter; COPPER TRANSPORTER,NULL; SOLUTE CARRIER FAMILY 31
(COPPER TRAN,CUFF.5004.1
(483 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64907 similar to UniRef100_A7PNX0 Cluster: Chromosome... 729 0.0
gnl|LJGI|TC68596 similar to UniRef100_A7PNX0 Cluster: Chromosome... 726 0.0
gnl|LJGI|TC68422 weakly similar to UniRef100_A7PNX0 Cluster: Chr... 105 2e-22
>gnl|LJGI|TC64907 similar to UniRef100_A7PNX0 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 805
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Plus
Query: 60 agatcctcctctcttagtgaagatgaagatgagaatgagaatgaacttgtattggggaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agatcctcctctcttagtgaagatgaagatgagaatgagaatgaacttgtattggggaaa 62
Query: 120 agatgccatagtacttttttcggagtggccaaaccacagtgttggcatgtacatgctagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agatgccatagtacttttttcggagtggccaaaccacagtgttggcatgtacatgctagc 122
Query: 180 tatcttgcttgtgtttttccttgccatgcttgctgaggttctgtcgaaccagcctctcat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tatcttgcttgtgtttttccttgccatgcttgctgaggttctgtcgaaccagcctctcat 182
Query: 240 caagcgcagaacaactcccattgttggagctttaactcaagctaccacctatgtgtttcg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 caagcgcagaacaactcccattgttggagctttaactcaagctaccacctatgtgtttcg 242
Query: 300 catcagtttcagttacttggtgatgcttgctgtcatgtccttcaacttgggaatcttcat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 catcagtttcagttacttggtgatgcttgctgtcatgtccttcaacttgggaatcttcat 302
Query: 360 agcggctgttgctggccatgccttgggattcttttttgcccagtctcgtgctcttgctct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agcggctgttgctggccatgccttgggattcttttttgcccagtctcgtgctcttgctct 362
Query: 420 tgccaata 427
||||||||
Sbjct: 363 tgccaata 370
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 456 tttgtcctctgatactgataaagtttga 483
||||||||||||||||||||||||||||
Sbjct: 396 tttgtcctctgatactgataaagtttga 423
>gnl|LJGI|TC68596 similar to UniRef100_A7PNX0 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 609
Score = 726 bits (366), Expect = 0.0
Identities = 372/374 (99%)
Strand = Plus / Plus
Query: 54 aagcccagatcctcctctcttagtgaagatgaagatgagaatgagaatgaacttgtattg 113
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 aagcccagatcctcccctcttagtgaagatgaagatgagaatgagaatgaacttgtattg 63
Query: 114 gggaaaagatgccatagtacttttttcggagtggccaaaccacagtgttggcatgtacat 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gggaaaagatgccatagtacttttttcggagtggccaaaccacagtgttggcatgtacat 123
Query: 174 gctagctatcttgcttgtgtttttccttgccatgcttgctgaggttctgtcgaaccagcc 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gctagctatcttgcttgtgtttttccttgccatgcttgctgaggttctgtcgaaccagcc 183
Query: 234 tctcatcaagcgcagaacaactcccattgttggagctttaactcaagctaccacctatgt 293
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tctcatcaagcgcggaacaactcccattgttggagctttaactcaagctaccacctatgt 243
Query: 294 gtttcgcatcagtttcagttacttggtgatgcttgctgtcatgtccttcaacttgggaat 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gtttcgcatcagtttcagttacttggtgatgcttgctgtcatgtccttcaacttgggaat 303
Query: 354 cttcatagcggctgttgctggccatgccttgggattcttttttgcccagtctcgtgctct 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cttcatagcggctgttgctggccatgccttgggattcttttttgcccagtctcgtgctct 363
Query: 414 tgctcttgccaata 427
||||||||||||||
Sbjct: 364 tgctcttgccaata 377
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 456 tttgtcctctgatactgataaagtttga 483
||||||||||||||||||||||||||||
Sbjct: 409 tttgtcctctgatactgataaagtttga 436
>gnl|LJGI|TC68422 weakly similar to UniRef100_A7PNX0 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 590
Score = 105 bits (53), Expect = 2e-22
Identities = 92/105 (87%)
Strand = Plus / Plus
Query: 312 ttacttggtgatgcttgctgtcatgtccttcaacttgggaatcttcatagcggctgttgc 371
|||| ||||||||||||||||||||||||||||| | |||||||||||||| ||||||||
Sbjct: 271 ttacctggtgatgcttgctgtcatgtccttcaacgttggaatcttcatagctgctgttgc 330
Query: 372 tggccatgccttgggattcttttttgcccagtctcgtgctcttgc 416
||| || |||||||||| || |||| ||||||||||| ||||
Sbjct: 331 tggacacaccttgggatttttcattgcaaagtctcgtgctattgc 375
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 109 tattggggaaaagatgccatagtacttttttcggagtggccaaaccacagtgttggcatg 168
|||||||||||| |||||| ||| |||||||| | |||||| ||| ||||||||||||||
Sbjct: 68 tattggggaaaacatgccacagtgcttttttctgggtggcctaacaacagtgttggcatg 127
Query: 169 tacatgctagctatcttgcttgtgtt 194
||||| ||||| |||| |||||||
Sbjct: 128 tacatcttagctctcttttttgtgtt 153