Miyakogusa Predicted Gene

Lj0g3v0091559.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0091559.1 tr|Q9SRQ0|Q9SRQ0_ARATH T21P5.12 protein
OS=Arabidopsis thaliana GN=T21P5.12 PE=2
SV=1,55.65,2e-19,coiled-coil,NULL; GLIOMA TUMOR SUPPRESSOR CANDIDATE
REGION GENE 1,NULL; seg,NULL,CUFF.4989.1
         (475 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78085 similar to UniRef100_A7PB20 Cluster: Chromosome...   264   4e-70
gnl|LJGI|TC73412 homologue to UniRef100_A7PB20 Cluster: Chromoso...   264   4e-70
gnl|LJGI|DC595479 homologue to UniRef100_A7PB20 Cluster: Chromos...   222   2e-57
gnl|LJGI|TC73901 similar to UniRef100_A7PB20 Cluster: Chromosome...   220   6e-57

>gnl|LJGI|TC78085 similar to UniRef100_A7PB20 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (90%)
          Length = 1322

 Score =  264 bits (133), Expect = 4e-70
 Identities = 133/133 (100%)
 Strand = Plus / Plus

                                                                       
Query: 153 cgccgcaatttctcgcttcccttccaacattgacgctcacttgcgccccattagacccat 212
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 cgccgcaatttctcgcttcccttccaacattgacgctcacttgcgccccattagacccat 298

                                                                       
Query: 213 caatctccaacaaaaccctaaccctaataatcccattctcaatttgcaccagaaccctaa 272
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 caatctccaacaaaaccctaaccctaataatcccattctcaatttgcaccagaaccctaa 358

                        
Query: 273 ttccaaccacctt 285
           |||||||||||||
Sbjct: 359 ttccaaccacctt 371



 Score =  230 bits (116), Expect = 6e-60
 Identities = 116/116 (100%)
 Strand = Plus / Plus

                                                                       
Query: 346 aagatggttcgacccgggaacccaatggagcttcagatggcgtaccaggacgcttggcgg 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aagatggttcgacccgggaacccaatggagcttcagatggcgtaccaggacgcttggcgg 491

                                                                   
Query: 406 gtctgccatccggatttcaagcgacccttttcttctcttgaagatgcctgcgagag 461
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gtctgccatccggatttcaagcgacccttttcttctcttgaagatgcctgcgagag 547


>gnl|LJGI|TC73412 homologue to UniRef100_A7PB20 Cluster: Chromosome chr16
           scaffold_10, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr16 scaffold_10, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (38%)
          Length = 685

 Score =  264 bits (133), Expect = 4e-70
 Identities = 133/133 (100%)
 Strand = Plus / Plus

                                                                       
Query: 153 cgccgcaatttctcgcttcccttccaacattgacgctcacttgcgccccattagacccat 212
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cgccgcaatttctcgcttcccttccaacattgacgctcacttgcgccccattagacccat 252

                                                                       
Query: 213 caatctccaacaaaaccctaaccctaataatcccattctcaatttgcaccagaaccctaa 272
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 caatctccaacaaaaccctaaccctaataatcccattctcaatttgcaccagaaccctaa 312

                        
Query: 273 ttccaaccacctt 285
           |||||||||||||
Sbjct: 313 ttccaaccacctt 325



 Score =  222 bits (112), Expect = 2e-57
 Identities = 115/116 (99%)
 Strand = Plus / Plus

                                                                       
Query: 346 aagatggttcgacccgggaacccaatggagcttcagatggcgtaccaggacgcttggcgg 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aagatggttcgacccgggaacccaatggagcttcagatggcgtaccaggacgcttggcgg 445

                                                                   
Query: 406 gtctgccatccggatttcaagcgacccttttcttctcttgaagatgcctgcgagag 461
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gtctgccatccagatttcaagcgacccttttcttctcttgaagatgcctgcgagag 501


>gnl|LJGI|DC595479 homologue to UniRef100_A7PB20 Cluster: Chromosome chr16
           scaffold_10, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr16 scaffold_10, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (18%)
          Length = 292

 Score =  222 bits (112), Expect = 2e-57
 Identities = 115/116 (99%)
 Strand = Plus / Plus

                                                                       
Query: 346 aagatggttcgacccgggaacccaatggagcttcagatggcgtaccaggacgcttggcgg 405
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 aagatggttccacccgggaacccaatggagcttcagatggcgtaccaggacgcttggcgg 200

                                                                   
Query: 406 gtctgccatccggatttcaagcgacccttttcttctcttgaagatgcctgcgagag 461
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtctgccatccggatttcaagcgacccttttcttctcttgaagatgcctgcgagag 256



 Score =  157 bits (79), Expect = 7e-38
 Identities = 79/79 (100%)
 Strand = Plus / Plus

                                                                       
Query: 207 acccatcaatctccaacaaaaccctaaccctaataatcccattctcaatttgcaccagaa 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   acccatcaatctccaacaaaaccctaaccctaataatcccattctcaatttgcaccagaa 60

                              
Query: 267 ccctaattccaaccacctt 285
           |||||||||||||||||||
Sbjct: 61  ccctaattccaaccacctt 79


>gnl|LJGI|TC73901 similar to UniRef100_A7PB20 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (94%)
          Length = 1471

 Score =  220 bits (111), Expect = 6e-57
 Identities = 131/138 (94%), Gaps = 6/138 (4%)
 Strand = Plus / Plus

                                                                       
Query: 154 gccgcaatttctcgcttcccttccaacattgacgctcacttgcgccccattagacccatc 213
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 280 gccgcaatttctcgcttcccttccagcattgacgctcacttgcgccccattagacccatc 339

                                                                       
Query: 214 aatctccaacaa------aaccctaaccctaataatcccattctcaatttgcaccagaac 267
           ||||||||||||      ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aatctccaacaaaaccctaaccctaaccctaataatcccattctcaatttgcaccagaac 399

                             
Query: 268 cctaattccaaccacctt 285
           ||||||||||||||||||
Sbjct: 400 cctaattccaaccacctt 417



 Score =  206 bits (104), Expect = 9e-53
 Identities = 113/116 (97%)
 Strand = Plus / Plus

                                                                       
Query: 346 aagatggttcgacccgggaacccaatggagcttcagatggcgtaccaggacgcttggcgg 405
           ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 466 aagatggttcgacccggaaacccaatggagctccagatggcgtaccaggacgcttggcgg 525

                                                                   
Query: 406 gtctgccatccggatttcaagcgacccttttcttctcttgaagatgcctgcgagag 461
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 526 gtctgccatccggatttcaagcgacccttttcttctctcgaagatgcctgcgagag 581