Miyakogusa Predicted Gene

Lj0g3v0091309.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0091309.1 Non Chatacterized Hit- tr|I1JNN2|I1JNN2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20503
PE,84.44,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; COLON CANCER-ASSOCIATED
PROTEIN MIC1,NULL; Mic1,Colon cancer-ass,CUFF.4992.1
         (2211 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP054731 similar to UniRef100_A7PVZ6 Cluster: Chromosom...   523   e-147

>gnl|LJGI|BP054731 similar to UniRef100_A7PVZ6 Cluster: Chromosome chr8 scaffold_34,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_34, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (11%)
          Length = 468

 Score =  523 bits (264), Expect = e-147
 Identities = 264/264 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1948 cttggcttacatcatgattatgtattactgctagtgcaagatggatactaccttgaagct 2007
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468  cttggcttacatcatgattatgtattactgctagtgcaagatggatactaccttgaagct 409

                                                                        
Query: 2008 ttgcgatacgcgcggaagtacagggtggataccatccggccatcgttgttcttagaagca 2067
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408  ttgcgatacgcgcggaagtacagggtggataccatccggccatcgttgttcttagaagca 349

                                                                        
Query: 2068 gcatttgtttccaatgactcccaacaccttgctgcagttctaagattctttacagatttc 2127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348  gcatttgtttccaatgactcccaacaccttgctgcagttctaagattctttacagatttc 289

                                                                        
Query: 2128 cttcctggctttggaaacacctcagagtataatagatactaccggatactgaatgagttg 2187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288  cttcctggctttggaaacacctcagagtataatagatactaccggatactgaatgagttg 229

                                    
Query: 2188 aactcgtctttgactgtttgagca 2211
            ||||||||||||||||||||||||
Sbjct: 228  aactcgtctttgactgtttgagca 205