Miyakogusa Predicted Gene

Lj0g3v0091139.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0091139.1 Non Chatacterized Hit- tr|I3S326|I3S326_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.96,0,seg,NULL;
RIBOSOMAL_L27,Ribosomal protein L27, conserved site; Ribosomal L27
protein,Ribosomal prote,CUFF.4962.1
         (579 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60549 similar to UniRef100_A7P9V3 Cluster: Chromosome...   890   0.0  

>gnl|LJGI|TC60549 similar to UniRef100_A7P9V3 Cluster: Chromosome chr14 scaffold_9,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_9, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (83%)
          Length = 913

 Score =  890 bits (449), Expect = 0.0
 Identities = 463/470 (98%)
 Strand = Plus / Plus

                                                                       
Query: 110 gccccacctcgttggtgtgggcacctcagactcggacgaccccgctgacaatccagaacg 169
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gccccacctcgttggtgtgggcacctcagactcggacgaccccgctgacaatccagaacg 221

                                                                       
Query: 170 ctcacaagaagggtgccggaagcaccaagaatggacgcgattccgagagcaagcgcctcg 229
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ctcacaagaagggtgccggaagcaccaagaatggacgcgattccgagagcaagcgcctcg 281

                                                                       
Query: 230 gtgtcaagatttatggtgaccaggttgctaaaccaggttccatcattgttcgtcagcgtg 289
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gtgtcaagatttatggtgaccaggttgctaaaccaggttccatcattgttcgtcagcgtg 341

                                                                       
Query: 290 gaactaagtttcacgcaggaaagaatgtggggcttggcaaagactataccatcttctcct 349
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gaactaagtttcacgcaggaaagaatgtggggcttggcaaagactataccatcttctcct 401

                                                                       
Query: 350 tgattgacggagttgtaaaatttgagaaatatggacctgacaggaaaaagattagtgttt 409
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tgattgacggagttgtaaaatttgagaaatatggacctgacaggaaaaagattagtgttt 461

                                                                       
Query: 410 acccgcgggaaataccagttgagaaccccaatagctatagagcaaggaagagagagtact 469
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 acccgcgggaaataccagttgagaaccccaatagctatagagcaaggaagagagagtact 521

                                                                       
Query: 470 tcaagatgaggcgtgnnnnnnngaaagctagacaagaagctagaattcttcgatcccaac 529
           |||||||||||||||       ||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tcaagatgaggcgtgaaaaaaagaaagctagacaagaagctagaattcttcgatcccaac 581

                                                             
Query: 530 tggtgctggcttctactgatgatgctgcaatcacaaatccaatgtgctga 579
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tggtgctggcttctactgatgatgctgcaatcacaaatccaatgtgctga 631



 Score =  105 bits (53), Expect = 3e-22
 Identities = 53/53 (100%)
 Strand = Plus / Plus

                                                                
Query: 1   atggctgcatcatcactgtgcatgagcttcaacatagcaacagcattcaaagg 53
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53  atggctgcatcatcactgtgcatgagcttcaacatagcaacagcattcaaagg 105