Miyakogusa Predicted Gene
- Lj0g3v0091119.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0091119.1 Non Chatacterized Hit- tr|I1LLA0|I1LLA0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37904
PE,79.41,0,GDHRDH,Glucose/ribitol dehydrogenase; SDRFAMILY,Short-chain
dehydrogenase/reductase SDR; no descript,CUFF.4953.1
(927 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024258 similar to UniRef100_Q6DLW2 Cluster: Short-cha... 1219 0.0
gnl|LJGI|TC70419 similar to UniRef100_A7QRU4 Cluster: Chromosome... 957 0.0
gnl|LJGI|TC75437 similar to UniRef100_A7QRU4 Cluster: Chromosome... 418 e-116
>gnl|LJGI|GO024258 similar to UniRef100_Q6DLW2 Cluster: Short-chain
dehydrogenase/reductase; n=1; Solanum tuberosum|Rep:
Short-chain dehydrogenase/reductase - Solanum tuberosum
(Potato), partial (73%)
Length = 760
Score = 1219 bits (615), Expect = 0.0
Identities = 645/650 (99%), Gaps = 5/650 (0%)
Strand = Plus / Plus
Query: 120 accaaggctattaggcaaagtggcattggtcactggcggagcatccggaatcggagaaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 accaaggctattaggcaaagtggcattggtcactggcggagcatccggaatcggagaaag 166
Query: 180 cattgcccgcctgttccacacgaacggcgctaaaatctgcatagctgacatgcaagacaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 cattgcccgcctgttccacacgaacggcgctaaaatctgcatagctgacatgcaagacaa 226
Query: 240 tctcggaaatcaggtctgcgaatccctcggcgacgaagcaaacgtttgtttcttgcactg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tctcggaaatcaggtctgcgaatccctcggcgacgaagcaaacgtttgtttcttgcactg 286
Query: 300 tgatgttaccgaggaaaacgatgttcgcaatgcagtggacatgactgtggctaaattcgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tgatgttaccgaggaaaacgatgttcgcaatgcagtggacatgactgtggctaaattcgg 346
Query: 360 cacccttgacatcatagtgaacaatgccggaatctccggtgccccttgccctgatatccg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 cacccttgacatcatagtgaacaatgccggaatctccggtgccccttgccctgatatccg 406
Query: 420 caatgtggacttatcagatttcgacaaagtcttcaatgtgaatgtgaagggagtgttcca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 caatgtggacttatcagatttcgacaaagtcttcaatgtgaatgtgaagggagtgttcca 466
Query: 480 tgggatgaaacatgctgcaagaatcatgatcccaaagaagaaaggctcaatcatttctct 539
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 467 tgggatgaaacatgctgcaagaatcatgatccc-aagaagaaaggctcaatcatttctct 525
Query: 540 gtgcagtgtggcaagtacaatgggagggttaggaccacatgcatacacagggtccaagca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gtgcagtgtggcaagtacaatgggagggttaggaccacatgcatacacagggtccaagca 585
Query: 600 tgctgtgttagggctaacaaagaatgtttcagctgaattgggaaatcatggaataagagt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tgctgtgttagggctaacaaagaatgtttcagctgaattgggaaatcatggaataagagt 645
Query: 660 gaactgtgtttccccttattgtgtggcaactggtttggccttggctcatttgcctgagga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gaactgtgtttccccttattgtgtggcaactggtttggccttggctcatttgcctgag-- 703
Query: 720 agagaggactgaggatgcaatggctgggtttcgttcttttgttgggagga 769
|||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 704 agagaggactga-gatgcaatggct-ggtttcgttcttttgttgggagga 751
Score = 131 bits (66), Expect = 8e-30
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 16 actatctcacattctaggaacacagagagaaagaaagtgcagacagccatgtccacaacc 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 actatctcacattctaggaacacagagagaaagaaagtgcagacagccatgtccacaacc 62
Query: 76 actatt 81
||||||
Sbjct: 63 actatt 68
>gnl|LJGI|TC70419 similar to UniRef100_A7QRU4 Cluster: Chromosome chr13 scaffold_152,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_152, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 561
Score = 957 bits (483), Expect = 0.0
Identities = 483/483 (100%)
Strand = Plus / Plus
Query: 120 accaaggctattaggcaaagtggcattggtcactggcggagcatccggaatcggagaaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 accaaggctattaggcaaagtggcattggtcactggcggagcatccggaatcggagaaag 138
Query: 180 cattgcccgcctgttccacacgaacggcgctaaaatctgcatagctgacatgcaagacaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 cattgcccgcctgttccacacgaacggcgctaaaatctgcatagctgacatgcaagacaa 198
Query: 240 tctcggaaatcaggtctgcgaatccctcggcgacgaagcaaacgtttgtttcttgcactg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tctcggaaatcaggtctgcgaatccctcggcgacgaagcaaacgtttgtttcttgcactg 258
Query: 300 tgatgttaccgaggaaaacgatgttcgcaatgcagtggacatgactgtggctaaattcgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgatgttaccgaggaaaacgatgttcgcaatgcagtggacatgactgtggctaaattcgg 318
Query: 360 cacccttgacatcatagtgaacaatgccggaatctccggtgccccttgccctgatatccg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cacccttgacatcatagtgaacaatgccggaatctccggtgccccttgccctgatatccg 378
Query: 420 caatgtggacttatcagatttcgacaaagtcttcaatgtgaatgtgaagggagtgttcca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 caatgtggacttatcagatttcgacaaagtcttcaatgtgaatgtgaagggagtgttcca 438
Query: 480 tgggatgaaacatgctgcaagaatcatgatcccaaagaagaaaggctcaatcatttctct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgggatgaaacatgctgcaagaatcatgatcccaaagaagaaaggctcaatcatttctct 498
Query: 540 gtgcagtgtggcaagtacaatgggagggttaggaccacatgcatacacagggtccaagca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gtgcagtgtggcaagtacaatgggagggttaggaccacatgcatacacagggtccaagca 558
Query: 600 tgc 602
|||
Sbjct: 559 tgc 561
Score = 67.9 bits (34), Expect = 1e-10
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 48 gaaagtgcagacagccatgtccacaaccactatt 81
||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaagtgcagacagccatgtccacaaccactatt 34
>gnl|LJGI|TC75437 similar to UniRef100_A7QRU4 Cluster: Chromosome chr13 scaffold_152,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_152, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 542
Score = 418 bits (211), Expect = e-116
Identities = 223/227 (98%)
Strand = Plus / Plus
Query: 701 tggctcatttgcctgaggaagagaggactgaggatgcaatggctgggtttcgttcttttg 760
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 1 tggctcatttgcctgaggaagagaggactgaggatgccatggctggttttcgttcttttg 60
Query: 761 ttgggaggaatgcaaacttgcaaggggtagagttaactgctaatgatgtggctaatgctg 820
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgggaggaatgccaacttgcaaggggtagagttaactgctaatgatgtggctaatgctg 120
Query: 821 tgctcttccttgcaagtgatgatgcgaggtatgtgagtggacagaatctcatgattgatg 880
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctcttccttgccagtgatgatgcgaggtatgtgagtggacagaatctcatgattgatg 180
Query: 881 gagggttcaccaatgcaaatcacttactcagagtttttagatgatca 927
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagggttcaccaatgcaaatcacttactcagagtttttagatgatca 227