Miyakogusa Predicted Gene
- Lj0g3v0091079.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0091079.1 tr|B9I3U2|B9I3U2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_570288 PE=4
SV=1,61.82,0.000000000003,F-box,F-box domain, cyclin-like; A Receptor
for Ubiquitination Targets,F-box domain, cyclin-like; se,CUFF.4947.1
(657 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57473 similar to UniRef100_A7PHI4 Cluster: Chromosome... 1287 0.0
>gnl|LJGI|TC57473 similar to UniRef100_A7PHI4 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 844
Score = 1287 bits (649), Expect = 0.0
Identities = 655/657 (99%)
Strand = Plus / Plus
Query: 1 atggaggagaatccatcgccatcatcatcatcaccaccaccatcgaaatcgatcacgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 atggaggagaatccatcgccatcatcatcatcaccaccaccatcgaaatcgatcacgaag 93
Query: 61 ggaaaagcttcaaccgattcgatcatgggcgtgggtttgctcaacgacgaccttctccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 ggaaaagcttcaaccgattcgatcatgggcgtgggtttgctcaacgacgaccttctccag 153
Query: 121 aacattctcaccaggcttcctgccctatcgttcgcttcagcagcttgcgttagcaaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aacattctcaccaggcttcctgccctatcgttcgcttcagcagcttgcgttagcaaaaca 213
Query: 181 tggaactctgtctccaatcgcatcctttctcgtcccaagctctcatctgcgctttctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tggaactctgtctccaatcgcatcctttctcgtcccaagctctcatctgcgctttctctc 273
Query: 241 aacccttcactcaccgatgcagtgaacgaggttcttcacaaggttctagctgagccaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aacccttcactcaccgatgcagtgaacgaggttcttcacaaggttctagctgagccaatt 333
Query: 301 cgaccttatttcgcaattgtcaatgttggaagtggattcgaatcgtcaaagattctgcgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cgaccttatttcgcaattgtcaatgttggaagtggattcgaatcgtcaaagattctgcgg 393
Query: 361 cttgttagaaagagattggggtttaatattccggttattgtctcggtgacgaatggtatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cttgttagaaagagattggggtttaatattccggttattgtctcggtgacgaatggtatt 453
Query: 421 atgggaagggatgctcttactgatgaatttaaagaggtcaagtggggtgcgctttttagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 atgggaagggatgctcttactgatgaatttaaagaggtcaagtggggtgcgctttttagt 513
Query: 481 ggcattgacagtgaagcatatgcaagaaatctgaatgaaggcatagtgttgaccgttgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggcattgacagtgaagcatatgcaagaaatctgaatgaaggcatagtgttgaccgttgga 573
Query: 541 tacttgccgggattaaaagttgaagctataccattgcgtcgaccgcccaagacacctcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tacttgccgggattaaaagttgaagctataccattgcgtcgaccgcccaagacacctcaa 633
Query: 601 gaaccatggattgacaattttgtgatggatatcaaggaatattctgcctctgtctcc 657
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 634 gaaccacggattgacaattttgtgatggatatcaaggaatattcggcctctgtctcc 690